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Spatial and temporal heterogeneity in human mobility patterns in Holocene Southwest Asia and the East Mediterranean.


ABSTRACT: We present a spatiotemporal picture of human genetic diversity in Anatolia, Iran, Levant, South Caucasus, and the Aegean, a broad region that experienced the earliest Neolithic transition and the emergence of complex hierarchical societies. Combining 35 new ancient shotgun genomes with 382 ancient and 23 present-day published genomes, we found that genetic diversity within each region steadily increased through the Holocene. We further observed that the inferred sources of gene flow shifted in time. In the first half of the Holocene, Southwest Asian and the East Mediterranean populations homogenized among themselves. Starting with the Bronze Age, however, regional populations diverged from each other, most likely driven by gene flow from external sources, which we term "the expanding mobility model." Interestingly, this increase in inter-regional divergence can be captured by outgroup-f3-based genetic distances, but not by the commonly used FST statistic, due to the sensitivity of FST, but not outgroup-f3, to within-population diversity. Finally, we report a temporal trend of increasing male bias in admixture events through the Holocene.

SUBMITTER: Koptekin D 

PROVIDER: S-EPMC9839366 | biostudies-literature | 2023 Jan

REPOSITORIES: biostudies-literature

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Spatial and temporal heterogeneity in human mobility patterns in Holocene Southwest Asia and the East Mediterranean.

Koptekin Dilek D   Yüncü Eren E   Rodríguez-Varela Ricardo R   Altınışık N Ezgi NE   Psonis Nikolaos N   Kashuba Natalia N   Yorulmaz Sevgi S   George Robert R   Kazancı Duygu Deniz DD   Kaptan Damla D   Gürün Kanat K   Vural Kıvılcım Başak KB   Gemici Hasan Can HC   Vassou Despoina D   Daskalaki Evangelia E   Karamurat Cansu C   Lagerholm Vendela K VK   Erdal Ömür Dilek ÖD   Kırdök Emrah E   Marangoni Aurelio A   Schachner Andreas A   Üstündağ Handan H   Shengelia Ramaz R   Bitadze Liana L   Elashvili Mikheil M   Stravopodi Eleni E   Özbaşaran Mihriban M   Duru Güneş G   Nafplioti Argyro A   Rose C Brian CB   Gencer Tuğba T   Darbyshire Gareth G   Gavashelishvili Alexander A   Pitskhelauri Konstantine K   Çevik Özlem Ö   Vuruşkan Osman O   Kyparissi-Apostolika Nina N   Büyükkarakaya Ali Metin AM   Oğuzhanoğlu Umay U   Günel Sevinç S   Tabakaki Eugenia E   Aliev Akper A   Ibrahimov Anar A   Shadlinski Vaqif V   Sampson Adamantios A   Kılınç Gülşah Merve GM   Atakuman Çiğdem Ç   Stamatakis Alexandros A   Poulakakis Nikos N   Erdal Yılmaz Selim YS   Pavlidis Pavlos P   Storå Jan J   Özer Füsun F   Götherström Anders A   Somel Mehmet M  

Current biology : CB 20221208 1


We present a spatiotemporal picture of human genetic diversity in Anatolia, Iran, Levant, South Caucasus, and the Aegean, a broad region that experienced the earliest Neolithic transition and the emergence of complex hierarchical societies. Combining 35 new ancient shotgun genomes with 382 ancient and 23 present-day published genomes, we found that genetic diversity within each region steadily increased through the Holocene. We further observed that the inferred sources of gene flow shifted in t  ...[more]

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