Probing ion binding in the selectivity filter of the Ca_v1.1 channel with molecular dynamics.

ABSTRACT: Ca_v1.1 is the voltage-gated calcium channel essential for the contraction of skeletal muscles upon membrane potential changes. Structural determination of the Ca_v1.1 channel opens the avenue toward understanding of the structure-function relationship of voltage-gated calcium channels. Here, we show that there exist two Ca²⁺-binding sites, termed S1 and S2, within the selectivity filter of Ca_v1.1 through extensive molecular dynamics simulations on various initial ion arrangement configurations. The formation of both binding sites is associated with the four Glu residues (Glu292/614/1014/1323) that constitute the so-called EEEE locus. At the S1 site near the extracellular side, the Ca²⁺ ion is coordinated with the negatively charged carb

SUBMITTER: Zhu J 

PROVIDER: S-EPMC9941718 | biostudies-literature | 2023 Feb

REPOSITORIES: biostudies-literature