Roadmap to the study of gene and protein phylogeny and evolution-A practical guide.

ABSTRACT: Developments in sequencing technologies and the sequencing of an ever-increasing number of genomes have revolutionised studies of biodiversity and organismal evolution. This accumulation of data has been paralleled by the creation of numerous public biological databases through which the scientific community can mine the sequences and annotations of genomes, transcriptomes, and proteomes of multiple species. However, to find the appropriate databases and bioinformatic tools for respective inquiries and aims can be challenging. Here, we present a compilation of DNA and protein databases, as well as bioinformatic tools for phylogenetic reconstruction and a wide range of studies on molecular evolution. We provide a protocol for information extraction from biological databases and simple phylo

SUBMITTER: Jacques F 

PROVIDER: S-EPMC9955684 | biostudies-literature | 2023

REPOSITORIES: biostudies-literature