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Learning deep abdominal CT registration through adaptive loss weighting and synthetic data generation.


ABSTRACT:

Purpose

This study aims to explore training strategies to improve convolutional neural network-based image-to-image deformable registration for abdominal imaging.

Methods

Different training strategies, loss functions, and transfer learning schemes were considered. Furthermore, an augmentation layer which generates artificial training image pairs on-the-fly was proposed, in addition to a loss layer that enables dynamic loss weighting.

Results

Guiding registration using segmentations in the training step proved beneficial for deep-learning-based image registration. Finetuning the pretrained model from the brain MRI dataset to the abdominal CT dataset further improved performance on the latter application, removing the need for a large dataset to yield satisfactory performance. Dynamic loss weighting also marginally improved performance, all without impacting inference runtime.

Conclusion

Using simple concepts, we improved the performance of a commonly used deep image registration architecture, VoxelMorph. In future work, our framework, DDMR, should be validated on different datasets to further assess its value.

SUBMITTER: Perez de Frutos J 

PROVIDER: S-EPMC9956065 | biostudies-literature | 2023

REPOSITORIES: biostudies-literature

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Publications

Learning deep abdominal CT registration through adaptive loss weighting and synthetic data generation.

Pérez de Frutos Javier J   Pedersen André A   Pelanis Egidijus E   Bouget David D   Survarachakan Shanmugapriya S   Langø Thomas T   Elle Ole-Jakob OJ   Lindseth Frank F  

PloS one 20230224 2


<h4>Purpose</h4>This study aims to explore training strategies to improve convolutional neural network-based image-to-image deformable registration for abdominal imaging.<h4>Methods</h4>Different training strategies, loss functions, and transfer learning schemes were considered. Furthermore, an augmentation layer which generates artificial training image pairs on-the-fly was proposed, in addition to a loss layer that enables dynamic loss weighting.<h4>Results</h4>Guiding registration using segme  ...[more]

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