Unknown

Dataset Information

0

Whole Genome Metabolism - Oryzias latipes

ABSTRACT:

Whole Genome Metabolism of "Oryzias latipes"
This is a whole genome metabolism model of Oryzias latipes.
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000140257 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000140257 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

Json Xml
altmetric image

Publications

The medaka draft genome and insights into vertebrate genome evolution.

Kasahara Masahiro M   Naruse Kiyoshi K   Sasaki Shin S   Nakatani Yoichiro Y   Qu Wei W   Ahsan Budrul B   Yamada Tomoyuki T   Nagayasu Yukinobu Y   Doi Koichiro K   Kasai Yasuhiro Y   Jindo Tomoko T   Kobayashi Daisuke D   Shimada Atsuko A   Toyoda Atsushi A   Kuroki Yoko Y   Fujiyama Asao A   Sasaki Takashi T   Shimizu Atsushi A   Asakawa Shuichi S   Shimizu Nobuyoshi N   Hashimoto Shin-Ichi S   Yang Jun J   Lee Yongjun Y   Matsushima Kouji K   Sugano Sumio S   Sakaizumi Mitsuru M   Narita Takanori T   Ohishi Kazuko K   Haga Shinobu S   Ohta Fumiko F   Nomoto Hisayo H   Nogata Keiko K   Morishita Tomomi T   Endo Tomoko T   Shin-I Tadasu T   Takeda Hiroyuki H   Morishita Shinichi S   Kohara Yuji Y  

Nature 20070601 7145

Teleosts comprise more than half of all vertebrate species and have adapted to a variety of marine and freshwater habitats. Their genome evolution and diversification are important subjects for the understanding of vertebrate evolution. Although draft genome sequences of two pufferfishes have been published, analysis of more fish genomes is desirable. Here we report a high-quality draft genome sequence of a small egg-laying freshwater teleost, medaka (Oryzias latipes). Medaka is native to East A  ...[more]

PMID: 17554307

Publication: 1/2

Similar Datasets

Unknown Deciphering Clostridium tyrobutyricum Metabolism Based on the Whole-Genome Sequence and Proteome Analyses.
| S-EPMC4916380 | biostudies-literature
Unknown Indel detection from Whole Genome Sequencing data and association with lipid metabolism in pigs.
| S-EPMC6597088 | biostudies-literature
Unknown Rapid pulsed whole genome sequencing for comprehensive acute diagnostics of inborn errors of metabolism.
| S-EPMC4299811 | biostudies-literature
Unknown Whole-genome sequencing of Aspergillus tubingensis G131 and overview of its secondary metabolism potential.
| S-EPMC6389250 | biostudies-literature
Unknown Integration of physiologically relevant photosynthetic energy flows into whole genome models of light-driven metabolism.
| S-EPMC9826171 | biostudies-literature
Unknown Genome assembly of the Brassicaceae diploid Orychophragmus violaceus reveals complex whole-genome duplication and evolution of dihydroxy fatty acid metabolism.
| S-EPMC10030321 | biostudies-literature
Unknown Association between fatty acid metabolism gene mutations and Mycobacterium tuberculosis transmission revealed by whole genome sequencing.
| S-EPMC10691062 | biostudies-literature
Unknown A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis.
| S-EPMC2173943 | biostudies-literature
Unknown Whole genome sequencing analysis of Plasmodium vivax using whole genome capture.
| S-EPMC3410760 | biostudies-literature
Unknown De Novo Whole-Genome Sequencing of the Wood Rot Fungus Polyporus brumalis, Which Exhibits Potential Terpenoid Metabolism.
| S-EPMC5511909 | biostudies-literature