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Whole Genome Metabolism - Novosphingobium sp. PP1Y


ABSTRACT:

Whole Genome Metabolism of "Novosphingobium sp. PP1Y"
This is a whole genome metabolism model of Novosphingobium sp. PP1Y.
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000140260 .
Other models with the same genus include BMID000000000523 BMID000000000524 BMID000000000525 BMID000000000526 BMID000000000527 BMID000000000528 BMID000000000529 BMID000000000530 BMID000000000531 BMID000000000532 BMID000000000533 BMID000000000534 BMID000000000535 BMID000000000536 BMID000000000537 BMID000000000538 BMID000000029527 BMID000000029528 BMID000000029529 BMID000000029530 BMID000000029531 BMID000000029532 BMID000000029533 BMID000000029534 BMID000000029535 BMID000000029536 BMID000000029537 BMID000000029538 BMID000000029539 BMID000000029540 BMID000000029541 BMID000000029542 BMID000000029543 BMID000000029544 BMID000000029545 BMID000000029546 BMID000000029547 BMID000000029548 BMID000000029549 BMID000000029550 BMID000000029551 BMID000000029552 BMID000000029553 BMID000000029554 BMID000000029555 BMID000000029556 BMID000000029557 BMID000000029558 BMID000000029559 BMID000000029560 BMID000000029561 BMID000000029562 BMID000000029563 BMID000000029564 BMID000000029565 BMID000000029566 BMID000000029567 BMID000000029568 BMID000000029569 BMID000000029570 BMID000000029571 BMID000000029572 BMID000000029573 BMID000000029574 BMID000000029575 BMID000000029576 BMID000000029577 BMID000000029578 BMID000000029579 BMID000000029580 BMID000000029581 BMID000000029582 BMID000000029583 BMID000000029584 BMID000000029585 BMID000000029586 BMID000000029587 BMID000000029588 BMID000000029589 BMID000000029590 BMID000000029591 BMID000000029592 BMID000000029593 BMID000000029594 BMID000000029595 BMID000000029596 BMID000000029597 BMID000000029598 BMID000000029599 BMID000000029600 BMID000000029601 BMID000000029602 BMID000000029603 BMID000000029604 BMID000000029605 BMID000000029606 BMID000000029607 BMID000000029608 BMID000000029609 BMID000000029610 BMID000000029611 BMID000000000567 BMID000000000568 BMID000000000569 BMID000000000570 BMID000000000571 BMID000000000572 BMID000000000573 BMID000000000574 BMID000000000575 BMID000000000576 BMID000000000577 BMID000000000578 BMID000000000579 BMID000000000580 BMID000000000581 BMID000000000582 BMID000000029773 BMID000000029774 BMID000000029775 BMID000000029776 BMID000000029777 BMID000000029778 BMID000000029779 BMID000000029780 BMID000000029781 BMID000000029782 BMID000000029783 BMID000000029784 BMID000000029785 BMID000000029786 BMID000000029787 BMID000000029788 BMID000000029789 BMID000000029790 BMID000000029791 BMID000000029792 BMID000000029793 BMID000000029794 BMID000000029795 BMID000000029796 BMID000000029797 BMID000000029798 BMID000000029799 BMID000000029800 BMID000000029801 BMID000000029802 BMID000000029803 BMID000000029804 BMID000000029805 BMID000000029806 BMID000000029807 BMID000000029808 BMID000000029809 BMID000000029810 BMID000000029811 BMID000000029812 BMID000000029813 BMID000000029814 BMID000000029815 BMID000000029816 BMID000000029817 BMID000000029818 BMID000000029819 BMID000000029820 BMID000000029821 BMID000000029822 BMID000000029823 BMID000000029824 BMID000000029825 BMID000000029826 BMID000000029827 BMID000000029828 BMID000000029829 BMID000000029830 BMID000000029831 BMID000000029832 BMID000000029833 BMID000000029834 BMID000000029835 BMID000000029836 BMID000000029837 BMID000000029838 BMID000000029839 BMID000000029840 BMID000000029841 BMID000000029842 BMID000000029843 BMID000000029844 BMID000000029845 BMID000000029846 BMID000000029847 BMID000000029848 BMID000000029849 BMID000000029850 BMID000000029851 BMID000000029852 BMID000000029853 BMID000000029854 BMID000000029855 BMID000000029856 BMID000000029857 BMID000000029858 BMID000000029859 BMID000000029860 BMID000000029861 BMID000000029862 BMID000000029863 BMID000000029864 BMID000000140503 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000140260 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

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Publications

De novo sequencing and assembly of the whole genome of Novosphingobium sp. strain PP1Y.

D'Argenio V V   Petrillo M M   Cantiello P P   Naso B B   Cozzuto L L   Notomista E E   Paolella G G   Di Donato A A   Salvatore F F  

Journal of bacteriology 20110617 16


Novosphingobium sp. strain PP1Y is a marine bacterium specifically adapted to use fuels as an energy source. We sequenced and assembled its entire genome using the Roche 454 genome sequencer system, which led to the identification of two plasmids and one megaplasmid, besides a 3.9-Mb circular chromosome. ...[more]

Publication: 1/2

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