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Whole Genome Metabolism - Chlamydomonas reinhardtii


ABSTRACT:

Whole Genome Metabolism of "Chlamydomonas reinhardtii"
This is a whole genome metabolism model of Chlamydomonas reinhardtii.
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000140487 .
Other models with the same genus include BMID000000024435 BMID000000024436 BMID000000024437 BMID000000024438 BMID000000024439 BMID000000024440 BMID000000024441 BMID000000024442 BMID000000024443 BMID000000024444 BMID000000024445 BMID000000024446 BMID000000024447 BMID000000024448 BMID000000024449 BMID000000024450 BMID000000024451 BMID000000024452 BMID000000024453 BMID000000024454 BMID000000024455 BMID000000024456 BMID000000024457 BMID000000024458 BMID000000024459 BMID000000024460 BMID000000024461 BMID000000024462 BMID000000024463 BMID000000024464 BMID000000128318 BMID000000128319 BMID000000128320 BMID000000128321 BMID000000128322 BMID000000128323 BMID000000128324 BMID000000128325 BMID000000128326 BMID000000128327 BMID000000128328 BMID000000128329 BMID000000128330 BMID000000128331 BMID000000128332 BMID000000128333 BMID000000128334 BMID000000128335 BMID000000128336 BMID000000128337 BMID000000128338 BMID000000128339 BMID000000128340 BMID000000128341 BMID000000128342 BMID000000128343 BMID000000128344 BMID000000128345 BMID000000128346 BMID000000128347 BMID000000128348 BMID000000128349 BMID000000128350 BMID000000128351 BMID000000128352 BMID000000128353 BMID000000128354 BMID000000128355 BMID000000128356 BMID000000128357 BMID000000128358 BMID000000128359 BMID000000128360 BMID000000128361 BMID000000128362 BMID000000128363 BMID000000128364 BMID000000128365 BMID000000128366 BMID000000128367 BMID000000128368 BMID000000128369 BMID000000128370 BMID000000128371 BMID000000128372 BMID000000128373 BMID000000128374 BMID000000128375 BMID000000128376 BMID000000128377 BMID000000128378 BMID000000128379 BMID000000128380 BMID000000128381 BMID000000128382 BMID000000128383 BMID000000128384 BMID000000128385 BMID000000128386 BMID000000128387 BMID000000128388 BMID000000128389 BMID000000128390 BMID000000128391 BMID000000128392 BMID000000128393 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000140487 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

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Publications

The Chlamydomonas genome reveals the evolution of key animal and plant functions.

Merchant Sabeeha S SS   Prochnik Simon E SE   Vallon Olivier O   Harris Elizabeth H EH   Karpowicz Steven J SJ   Witman George B GB   Terry Astrid A   Salamov Asaf A   Fritz-Laylin Lillian K LK   Maréchal-Drouard Laurence L   Marshall Wallace F WF   Qu Liang-Hu LH   Nelson David R DR   Sanderfoot Anton A AA   Spalding Martin H MH   Kapitonov Vladimir V VV   Ren Qinghu Q   Ferris Patrick P   Lindquist Erika E   Shapiro Harris H   Lucas Susan M SM   Grimwood Jane J   Schmutz Jeremy J   Cardol Pierre P   Cerutti Heriberto H   Chanfreau Guillaume G   Chen Chun-Long CL   Cognat Valérie V   Croft Martin T MT   Dent Rachel R   Dutcher Susan S   Fernández Emilio E   Fukuzawa Hideya H   González-Ballester David D   González-Halphen Diego D   Hallmann Armin A   Hanikenne Marc M   Hippler Michael M   Inwood William W   Jabbari Kamel K   Kalanon Ming M   Kuras Richard R   Lefebvre Paul A PA   Lemaire Stéphane D SD   Lobanov Alexey V AV   Lohr Martin M   Manuell Andrea A   Meier Iris I   Mets Laurens L   Mittag Maria M   Mittelmeier Telsa T   Moroney James V JV   Moseley Jeffrey J   Napoli Carolyn C   Nedelcu Aurora M AM   Niyogi Krishna K   Novoselov Sergey V SV   Paulsen Ian T IT   Pazour Greg G   Purton Saul S   Ral Jean-Philippe JP   Riaño-Pachón Diego Mauricio DM   Riekhof Wayne W   Rymarquis Linda L   Schroda Michael M   Stern David D   Umen James J   Willows Robert R   Wilson Nedra N   Zimmer Sara Lana SL   Allmer Jens J   Balk Janneke J   Bisova Katerina K   Chen Chong-Jian CJ   Elias Marek M   Gendler Karla K   Hauser Charles C   Lamb Mary Rose MR   Ledford Heidi H   Long Joanne C JC   Minagawa Jun J   Page M Dudley MD   Pan Junmin J   Pootakham Wirulda W   Roje Sanja S   Rose Annkatrin A   Stahlberg Eric E   Terauchi Aimee M AM   Yang Pinfen P   Ball Steven S   Bowler Chris C   Dieckmann Carol L CL   Gladyshev Vadim N VN   Green Pamela P   Jorgensen Richard R   Mayfield Stephen S   Mueller-Roeber Bernd B   Rajamani Sathish S   Sayre Richard T RT   Brokstein Peter P   Dubchak Inna I   Goodstein David D   Hornick Leila L   Huang Y Wayne YW   Jhaveri Jinal J   Luo Yigong Y   Martínez Diego D   Ngau Wing Chi Abby WC   Otillar Bobby B   Poliakov Alexander A   Porter Aaron A   Szajkowski Lukasz L   Werner Gregory G   Zhou Kemin K   Grigoriev Igor V IV   Rokhsar Daniel S DS   Grossman Arthur R AR  

Science (New York, N.Y.) 20071001 5848


Chlamydomonas reinhardtii is a unicellular green alga whose lineage diverged from land plants over 1 billion years ago. It is a model system for studying chloroplast-based photosynthesis, as well as the structure, assembly, and function of eukaryotic flagella (cilia), which were inherited from the common ancestor of plants and animals, but lost in land plants. We sequenced the approximately 120-megabase nuclear genome of Chlamydomonas and performed comparative phylogenomic analyses, identifying  ...[more]

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