Unknown

Dataset Information

0

Whole Genome Metabolism - Lotus japonicus

ABSTRACT:

Whole Genome Metabolism of "Lotus japonicus"
This is a whole genome metabolism model of Lotus japonicus.
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 62, April 2012, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 16.0, February 2012).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000140687 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000140687 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

Json Xml
altmetric image

Publications

<h4>Background</h4>Systems biology projects and omics technologies have led to a growing number of biochemical pathway models and reconstructions. However, the majority of these models are still created de novo, based on literature mining and the manual processing of pathway data.<h4>Results</h4>To increase the efficiency of model creation, the Path2Models project has automatically generated mathematical models from pathway representations using a suite of freely available software. Data sources  ...[more]

Similar Datasets

Unknown Deciphering Clostridium tyrobutyricum Metabolism Based on the Whole-Genome Sequence and Proteome Analyses.
| S-EPMC4916380 | biostudies-literature
Unknown Indel detection from Whole Genome Sequencing data and association with lipid metabolism in pigs.
| S-EPMC6597088 | biostudies-literature
Unknown Rapid pulsed whole genome sequencing for comprehensive acute diagnostics of inborn errors of metabolism.
| S-EPMC4299811 | biostudies-literature
Unknown Whole-genome sequencing of Aspergillus tubingensis G131 and overview of its secondary metabolism potential.
| S-EPMC6389250 | biostudies-literature
Unknown Integration of physiologically relevant photosynthetic energy flows into whole genome models of light-driven metabolism.
| S-EPMC9826171 | biostudies-literature
Unknown Genome assembly of the Brassicaceae diploid Orychophragmus violaceus reveals complex whole-genome duplication and evolution of dihydroxy fatty acid metabolism.
| S-EPMC10030321 | biostudies-literature
Unknown Association between fatty acid metabolism gene mutations and Mycobacterium tuberculosis transmission revealed by whole genome sequencing.
| S-EPMC10691062 | biostudies-literature
Unknown A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis.
| S-EPMC2173943 | biostudies-literature
Unknown De Novo Whole-Genome Sequencing of the Wood Rot Fungus Polyporus brumalis, Which Exhibits Potential Terpenoid Metabolism.
| S-EPMC5511909 | biostudies-literature
Unknown Divergent Retention of Sucrose Metabolism Genes after Whole Genome Triplication in the Tomato (<i>Solanum lycopersicum</i>).
| S-EPMC10747743 | biostudies-literature