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Whole Genome Metabolism - Aminobacterium colombiense (strain DSM 12261 / ALA-1)


ABSTRACT:

Whole Genome Metabolism of "Aminobacterium colombiense (strain DSM 12261 / ALA-1)"
This is a whole genome metabolism model of Aminobacterium colombiense (strain DSM 12261 / ALA-1).
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000140727 .
Other models with the same genus include BMID000000022103 BMID000000022104 BMID000000022105 BMID000000022106 BMID000000022107 BMID000000022108 BMID000000022109 BMID000000022110 BMID000000022111 BMID000000022112 BMID000000022113 BMID000000022114 BMID000000022115 BMID000000119053 BMID000000119054 BMID000000119055 BMID000000119056 BMID000000119057 BMID000000119058 BMID000000119059 BMID000000119060 BMID000000119061 BMID000000119062 BMID000000119063 BMID000000119064 BMID000000119065 BMID000000119066 BMID000000119067 BMID000000119068 BMID000000119069 BMID000000119070 BMID000000119071 BMID000000119072 BMID000000119073 BMID000000119074 BMID000000119075 BMID000000119076 BMID000000119077 BMID000000119078 BMID000000119079 BMID000000119080 BMID000000119081 BMID000000119082 BMID000000119083 BMID000000119084 BMID000000119085 BMID000000119086 BMID000000119087 BMID000000119088 BMID000000119089 BMID000000119090 BMID000000119091 BMID000000119092 BMID000000119093 BMID000000119094 BMID000000119095 BMID000000119096 BMID000000119097 BMID000000119098 BMID000000119099 BMID000000119100 BMID000000119101 BMID000000119102 BMID000000119103 BMID000000119104 BMID000000119105 BMID000000119106 BMID000000119107 BMID000000119108 BMID000000119109 BMID000000119110 BMID000000119111 BMID000000119112 BMID000000119113 BMID000000119114 BMID000000119115 BMID000000119116 BMID000000119117 BMID000000119118 BMID000000119119 BMID000000119120 BMID000000119121 BMID000000119122 BMID000000119123 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000140727 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

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Publications

Complete genome sequence of Aminobacterium colombiense type strain (ALA-1).

Chertkov Olga O   Sikorski Johannes J   Brambilla Evelyne E   Lapidus Alla A   Copeland Alex A   Glavina Del Rio Tijana T   Nolan Matt M   Lucas Susan S   Tice Hope H   Cheng Jan-Fang JF   Han Cliff C   Detter John C JC   Bruce David D   Tapia Roxanne R   Goodwin Lynne L   Pitluck Sam S   Liolios Konstantinos K   Ivanova Natalia N   Mavromatis Konstantinos K   Ovchinnikova Galina G   Pati Amrita A   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Chang Yun-Juan YJ   Jeffries Cynthia D CD   Spring Stefan S   Rohde Manfred M   Göker Markus M   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP  

Standards in genomic sciences 20100615 3


Aminobacterium colombiense Baena et al. 1999 is the type species of the genus Aminobacterium. This genus is of large interest because of its isolated phylogenetic location in the family Synergistaceae, its strictly anaerobic lifestyle, and its ability to grow by fermentation of a limited range of amino acids but not carbohydrates. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the second completed genome sequence of a member of  ...[more]

Publication: 1/2

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