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Whole Genome Metabolism - Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)


ABSTRACT:

Whole Genome Metabolism of "Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)"
This is a whole genome metabolism model of Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000140787 .
Other models with the same genus include BMID000000009317 BMID000000009318 BMID000000009319 BMID000000009320 BMID000000009321 BMID000000009322 BMID000000009323 BMID000000009324 BMID000000009325 BMID000000009326 BMID000000009327 BMID000000009328 BMID000000009329 BMID000000009330 BMID000000009331 BMID000000066810 BMID000000066811 BMID000000066812 BMID000000066813 BMID000000066814 BMID000000066815 BMID000000066816 BMID000000066817 BMID000000066818 BMID000000066819 BMID000000066820 BMID000000066821 BMID000000066822 BMID000000066823 BMID000000066824 BMID000000066825 BMID000000066826 BMID000000066827 BMID000000066828 BMID000000066829 BMID000000066830 BMID000000066831 BMID000000066832 BMID000000066833 BMID000000066834 BMID000000066835 BMID000000066836 BMID000000066837 BMID000000066838 BMID000000066839 BMID000000066840 BMID000000066841 BMID000000066842 BMID000000066843 BMID000000066844 BMID000000066845 BMID000000066846 BMID000000066847 BMID000000066848 BMID000000066849 BMID000000066850 BMID000000066851 BMID000000066852 BMID000000066853 BMID000000066854 BMID000000066855 BMID000000066856 BMID000000066857 BMID000000066858 BMID000000066859 BMID000000066860 BMID000000066861 BMID000000066862 BMID000000066863 BMID000000066864 BMID000000066865 BMID000000066866 BMID000000066867 BMID000000066868 BMID000000066869 BMID000000066870 BMID000000066871 BMID000000066872 BMID000000066873 BMID000000066874 BMID000000066875 BMID000000066876 BMID000000066877 BMID000000066878 BMID000000066879 BMID000000066880 BMID000000066881 BMID000000066882 BMID000000066883 BMID000000066884 BMID000000066885 BMID000000066886 BMID000000066887 BMID000000066888 BMID000000066889 BMID000000066890 BMID000000066891 BMID000000066892 BMID000000066893 BMID000000066894 BMID000000066895 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000140787 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

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Publications

Complete genome sequence of Dyadobacter fermentans type strain (NS114).

Lang Elke E   Lapidus Alla A   Chertkov Olga O   Brettin Thomas T   Detter John C JC   Han Cliff C   Copeland Alex A   Glavina Del Rio Tijana T   Nolan Matt M   Chen Feng F   Lucas Susan S   Tice Hope H   Cheng Jan-Fang JF   Land Miriam M   Hauser Loren L   Chang Yun-Juan YJ   Jeffries Cynthia D CD   Kopitz Marcus M   Bruce David D   Goodwin Lynne L   Pitluck Sam S   Ovchinnikova Galina G   Pati Amrita A   Ivanova Natalia N   Mavrommatis Konstantinos K   Chen Amy A   Palaniappan Krishna K   Chain Patrick P   Bristow Jim J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Göker Markus M   Rohde Manfred M   Kyrpides Nikos C NC   Klenk Hans-Peter HP  

Standards in genomic sciences 20090924 2


Dyadobacter fermentans (Chelius and Triplett, 2000) is the type species of the genus Dyadobacter. It is of phylogenetic interest because of its location in the Cytophagaceae, a very diverse family within the order 'Sphingobacteriales'. D. fermentans has a mainly respiratory metabolism, stains Gram-negative, is non-motile and oxidase and catalase positive. It is characterized by the production of cell filaments in aging cultures, a flexirubin-like pigment and its ability to ferment glucose, which  ...[more]

Publication: 1/2

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