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Whole Genome Metabolism - Hyperthermus butylicus (strain DSM 5456 / JCM 9403)


ABSTRACT:

Whole Genome Metabolism of "Hyperthermus butylicus (strain DSM 5456 / JCM 9403)"
This is a whole genome metabolism model of Hyperthermus butylicus (strain DSM 5456 / JCM 9403).
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000140823 .
Other models with the same genus include BMID000000014777 BMID000000014778 BMID000000014779 BMID000000014780 BMID000000014781 BMID000000014782 BMID000000014783 BMID000000014784 BMID000000014785 BMID000000014786 BMID000000014787 BMID000000014788 BMID000000014789 BMID000000014790 BMID000000014791 BMID000000014792 BMID000000089332 BMID000000089333 BMID000000089334 BMID000000089335 BMID000000089336 BMID000000089337 BMID000000089338 BMID000000089339 BMID000000089340 BMID000000089341 BMID000000089342 BMID000000089343 BMID000000089344 BMID000000089345 BMID000000089346 BMID000000089347 BMID000000089348 BMID000000089349 BMID000000089350 BMID000000089351 BMID000000089352 BMID000000089353 BMID000000089354 BMID000000089355 BMID000000089356 BMID000000089357 BMID000000089358 BMID000000089359 BMID000000089360 BMID000000089361 BMID000000089362 BMID000000089363 BMID000000089364 BMID000000089365 BMID000000089366 BMID000000089367 BMID000000089368 BMID000000089369 BMID000000089370 BMID000000089371 BMID000000089372 BMID000000089373 BMID000000089374 BMID000000089375 BMID000000089376 BMID000000089377 BMID000000089378 BMID000000089379 BMID000000089380 BMID000000089381 BMID000000089382 BMID000000089383 BMID000000089384 BMID000000089385 BMID000000089386 BMID000000089387 BMID000000089388 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000140823 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

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Publications

The genome of Hyperthermus butylicus: a sulfur-reducing, peptide fermenting, neutrophilic Crenarchaeote growing up to 108 degrees C.

Brügger Kim K   Chen Lanming L   Stark Markus M   Zibat Arne A   Redder Peter P   Ruepp Andreas A   Awayez Mariana M   She Qunxin Q   Garrett Roger A RA   Klenk Hans-Peter HP  

Archaea (Vancouver, B.C.) 20070501 2


Hyperthermus butylicus, a hyperthermophilic neutrophile and anaerobe, is a member of the archaeal kingdom Crenarchaeota. Its genome consists of a single circular chromosome of 1,667,163 bp with a 53.7% G+C content. A total of 1672 genes were annotated, of which 1602 are protein-coding, and up to a third are specific to H. butylicus. In contrast to some other crenarchaeal genomes, a high level of GUG and UUG start codons are predicted. Two cdc6 genes are present, but neither could be linked unamb  ...[more]

Publication: 1/2

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