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Whole Genome Metabolism - Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)


ABSTRACT:

Whole Genome Metabolism of "Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)"
This is a whole genome metabolism model of Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084).
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000141470 .
Other models with the same genus include BMID000000008061 BMID000000008062 BMID000000008063 BMID000000008064 BMID000000008065 BMID000000008066 BMID000000008067 BMID000000008068 BMID000000008069 BMID000000008070 BMID000000008071 BMID000000008072 BMID000000008073 BMID000000008074 BMID000000008075 BMID000000008076 BMID000000008077 BMID000000008078 BMID000000008079 BMID000000008080 BMID000000008081 BMID000000008082 BMID000000008083 BMID000000008084 BMID000000008085 BMID000000008086 BMID000000008087 BMID000000008088 BMID000000008089 BMID000000008090 BMID000000008091 BMID000000062051 BMID000000062052 BMID000000062053 BMID000000062054 BMID000000062055 BMID000000062056 BMID000000062057 BMID000000062058 BMID000000062059 BMID000000062060 BMID000000062061 BMID000000062062 BMID000000062063 BMID000000062064 BMID000000062065 BMID000000062066 BMID000000062067 BMID000000062068 BMID000000062069 BMID000000062070 BMID000000062071 BMID000000062072 BMID000000062073 BMID000000062074 BMID000000062075 BMID000000062076 BMID000000062077 BMID000000062078 BMID000000062079 BMID000000062080 BMID000000062081 BMID000000062082 BMID000000062083 BMID000000062084 BMID000000062085 BMID000000062086 BMID000000062087 BMID000000062088 BMID000000062089 BMID000000062090 BMID000000062091 BMID000000062092 BMID000000062093 BMID000000062094 BMID000000062095 BMID000000062096 BMID000000062097 BMID000000062098 BMID000000062099 BMID000000062100 BMID000000062101 BMID000000062102 BMID000000062103 BMID000000062104 BMID000000062105 BMID000000062106 BMID000000062107 BMID000000062108 BMID000000062109 BMID000000062110 BMID000000062111 BMID000000062112 BMID000000062113 BMID000000062114 BMID000000062115 BMID000000062116 BMID000000062117 BMID000000062118 BMID000000062119 BMID000000062120 BMID000000062121 BMID000000062122 BMID000000062123 BMID000000062124 BMID000000062125 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000141470 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

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Publications

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization.

Cuomo Christina A CA   Güldener Ulrich U   Xu Jin-Rong JR   Trail Frances F   Turgeon B Gillian BG   Di Pietro Antonio A   Walton Jonathan D JD   Ma Li-Jun LJ   Baker Scott E SE   Rep Martijn M   Adam Gerhard G   Antoniw John J   Baldwin Thomas T   Calvo Sarah S   Chang Yueh-Long YL   Decaprio David D   Gale Liane R LR   Gnerre Sante S   Goswami Rubella S RS   Hammond-Kosack Kim K   Harris Linda J LJ   Hilburn Karen K   Kennell John C JC   Kroken Scott S   Magnuson Jon K JK   Mannhaupt Gertrud G   Mauceli Evan E   Mewes Hans-Werner HW   Mitterbauer Rudolf R   Muehlbauer Gary G   Münsterkötter Martin M   Nelson David D   O'donnell Kerry K   Ouellet Thérèse T   Qi Weihong W   Quesneville Hadi H   Roncero M Isabel G MI   Seong Kye-Yong KY   Tetko Igor V IV   Urban Martin M   Waalwijk Cees C   Ward Todd J TJ   Yao Jiqiang J   Birren Bruce W BW   Kistler H Corby HC  

Science (New York, N.Y.) 20070901 5843


We sequenced and annotated the genome of the filamentous fungus Fusarium graminearum, a major pathogen of cultivated cereals. Very few repetitive sequences were detected, and the process of repeat-induced point mutation, in which duplicated sequences are subject to extensive mutation, may partially account for the reduced repeat content and apparent low number of paralogous (ancestrally duplicated) genes. A second strain of F. graminearum contained more than 10,000 single-nucleotide polymorphism  ...[more]

Publication: 1/2

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