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Whole Genome Metabolism - Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)


ABSTRACT:

Whole Genome Metabolism of "Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)"
This is a whole genome metabolism model of Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1).
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000141605 .
Other models with the same genus include BMID000000004041 BMID000000004042 BMID000000004043 BMID000000004044 BMID000000004045 BMID000000004046 BMID000000004047 BMID000000004048 BMID000000004049 BMID000000004050 BMID000000004051 BMID000000004052 BMID000000004053 BMID000000004054 BMID000000004055 BMID000000044652 BMID000000044653 BMID000000044654 BMID000000044655 BMID000000044656 BMID000000044657 BMID000000044658 BMID000000044659 BMID000000044660 BMID000000044661 BMID000000044662 BMID000000044663 BMID000000044664 BMID000000044665 BMID000000044666 BMID000000044667 BMID000000044668 BMID000000044669 BMID000000044670 BMID000000044671 BMID000000044672 BMID000000044673 BMID000000044674 BMID000000044675 BMID000000044676 BMID000000044677 BMID000000044678 BMID000000044679 BMID000000044680 BMID000000044681 BMID000000044682 BMID000000044683 BMID000000044684 BMID000000044685 BMID000000044686 BMID000000044687 BMID000000044688 BMID000000044689 BMID000000044690 BMID000000044691 BMID000000044692 BMID000000044693 BMID000000044694 BMID000000044695 BMID000000044696 BMID000000044697 BMID000000044698 BMID000000044699 BMID000000044700 BMID000000044701 BMID000000044702 BMID000000044703 BMID000000044704 BMID000000044705 BMID000000044706 BMID000000044707 BMID000000044708 BMID000000044709 BMID000000044710 BMID000000044711 BMID000000044712 BMID000000044713 BMID000000044714 BMID000000044715 BMID000000044716 BMID000000141569 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000141605 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

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Publications

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales.

Zhaxybayeva Olga O   Swithers Kristen S KS   Lapierre Pascal P   Fournier Gregory P GP   Bickhart Derek M DM   DeBoy Robert T RT   Nelson Karen E KE   Nesbø Camilla L CL   Doolittle W Ford WF   Gogarten J Peter JP   Noll Kenneth M KM  

Proceedings of the National Academy of Sciences of the United States of America 20090323 14


Since publication of the first Thermotogales genome, Thermotoga maritima strain MSB8, single- and multi-gene analyses have disagreed on the phylogenetic position of this order of Bacteria. Here we present the genome sequences of 4 additional members of the Thermotogales (Tt. petrophila, Tt. lettingae, Thermosipho melanesiensis, and Fervidobacterium nodosum) and a comprehensive comparative analysis including the original T. maritima genome. While ribosomal protein genes strongly place Thermotogal  ...[more]

Publication: 1/2

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