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Whole Genome Metabolism - Methylovorus sp. (strain SIP3-4)


ABSTRACT:

Whole Genome Metabolism of "Methylovorus sp. (strain SIP3-4)"
This is a whole genome metabolism model of Methylovorus sp. (strain SIP3-4).
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000141948 .
Other models with the same genus include BMID000000000230 BMID000000000231 BMID000000000232 BMID000000000233 BMID000000000234 BMID000000000235 BMID000000000236 BMID000000000237 BMID000000000238 BMID000000000239 BMID000000000240 BMID000000000241 BMID000000000242 BMID000000000243 BMID000000000244 BMID000000000245 BMID000000000246 BMID000000028267 BMID000000028268 BMID000000028269 BMID000000028270 BMID000000028271 BMID000000028272 BMID000000028273 BMID000000028274 BMID000000028275 BMID000000028276 BMID000000028277 BMID000000028278 BMID000000028279 BMID000000028280 BMID000000028281 BMID000000028282 BMID000000028283 BMID000000028284 BMID000000028285 BMID000000028286 BMID000000028287 BMID000000028288 BMID000000028289 BMID000000028290 BMID000000028291 BMID000000028292 BMID000000028293 BMID000000028294 BMID000000028295 BMID000000028296 BMID000000028297 BMID000000028298 BMID000000028299 BMID000000028300 BMID000000028301 BMID000000028302 BMID000000028303 BMID000000028304 BMID000000028305 BMID000000028306 BMID000000028307 BMID000000028308 BMID000000028309 BMID000000028310 BMID000000028311 BMID000000028312 BMID000000028313 BMID000000028314 BMID000000028315 BMID000000028316 BMID000000028317 BMID000000028318 BMID000000028319 BMID000000028320 BMID000000028321 BMID000000028322 BMID000000028323 BMID000000028324 BMID000000028325 BMID000000028326 BMID000000028327 BMID000000028328 BMID000000028329 BMID000000028330 BMID000000028331 BMID000000028332 BMID000000028333 BMID000000028334 BMID000000028335 BMID000000028336 BMID000000028337 BMID000000028338 BMID000000028339 BMID000000028340 BMID000000017643 BMID000000017644 BMID000000017645 BMID000000017646 BMID000000017647 BMID000000017648 BMID000000017649 BMID000000017650 BMID000000017651 BMID000000017652 BMID000000017653 BMID000000017654 BMID000000017655 BMID000000017656 BMID000000017657 BMID000000017658 BMID000000100999 BMID000000101000 BMID000000101001 BMID000000101002 BMID000000101003 BMID000000101004 BMID000000101005 BMID000000101006 BMID000000101007 BMID000000101008 BMID000000101009 BMID000000101010 BMID000000101011 BMID000000101012 BMID000000101013 BMID000000101014 BMID000000101015 BMID000000101016 BMID000000101017 BMID000000101018 BMID000000101019 BMID000000101020 BMID000000101021 BMID000000101022 BMID000000101023 BMID000000101024 BMID000000101025 BMID000000101026 BMID000000101027 BMID000000101028 BMID000000101029 BMID000000101030 BMID000000101031 BMID000000101032 BMID000000101033 BMID000000101034 BMID000000101035 BMID000000101036 BMID000000101037 BMID000000101038 BMID000000101039 BMID000000101040 BMID000000101041 BMID000000101042 BMID000000101043 BMID000000101044 BMID000000101045 BMID000000101046 BMID000000101047 BMID000000101048 BMID000000101049 BMID000000101050 BMID000000101051 BMID000000101052 BMID000000101053 BMID000000101054 BMID000000101055 BMID000000101056 BMID000000101057 BMID000000101058 BMID000000101059 BMID000000101060 BMID000000101061 BMID000000101062 BMID000000101063 BMID000000101064 BMID000000101065 BMID000000101066 BMID000000101067 BMID000000101068 BMID000000101069 BMID000000101070 BMID000000101071 BMID000000101072 BMID000000101073 BMID000000141357 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000141948 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

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Publications

Genomes of three methylotrophs from a single niche reveal the genetic and metabolic divergence of the methylophilaceae.

Lapidus Alla A   Clum Alicia A   Labutti Kurt K   Kaluzhnaya Marina G MG   Lim Sujung S   Beck David A C DA   Glavina Del Rio Tijana T   Nolan Matt M   Mavromatis Konstantinos K   Huntemann Marcel M   Lucas Susan S   Lidstrom Mary E ME   Ivanova Natalia N   Chistoserdova Ludmila L  

Journal of bacteriology 20110527 15


The genomes of three representatives of the family Methylophilaceae, Methylotenera mobilis JLW8, Methylotenera versatilis 301, and Methylovorus glucosetrophus SIP3-4, all isolated from a single study site, Lake Washington in Seattle, WA, were completely sequenced. These were compared to each other and to the previously published genomes of Methylobacillus flagellatus KT and an unclassified Methylophilales strain, HTCC2181. Comparative analysis revealed that the core genome of Methylophilaceae ma  ...[more]

Publication: 1/2

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