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Whole Genome Metabolism - Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)


ABSTRACT:

Whole Genome Metabolism of "Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)"
This is a whole genome metabolism model of Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1).
This model has been automatically generated by the SuBliMinaL Toolbox and libAnnotationSBML using information coming from from KEGG (release 66, April 2013, accessed via the resource's web services interface) and, where relevant, augmented with metabolic pathway information extracted from MetaCyc (version 17.0, March 2013).
This model has been produced by the path2models project and is currently hosted on BioModels Database and identified by: BMID000000142009 .
Other models with the same genus include BMID000000022966 BMID000000022967 BMID000000022968 BMID000000022969 BMID000000022970 BMID000000022971 BMID000000022972 BMID000000022973 BMID000000022974 BMID000000022975 BMID000000022976 BMID000000022977 BMID000000022978 BMID000000022979 BMID000000022980 BMID000000022981 BMID000000122692 BMID000000122693 BMID000000122694 BMID000000122695 BMID000000122696 BMID000000122697 BMID000000122698 BMID000000122699 BMID000000122700 BMID000000122701 BMID000000122702 BMID000000122703 BMID000000122704 BMID000000122705 BMID000000122706 BMID000000122707 BMID000000122708 BMID000000122709 BMID000000122710 BMID000000122711 BMID000000122712 BMID000000122713 BMID000000122714 BMID000000122715 BMID000000122716 BMID000000122717 BMID000000122718 BMID000000122719 BMID000000122720 BMID000000122721 BMID000000122722 BMID000000122723 BMID000000122724 BMID000000122725 BMID000000122726 BMID000000122727 BMID000000122728 BMID000000122729 BMID000000122730 BMID000000122731 BMID000000122732 BMID000000122733 BMID000000122734 BMID000000122735 BMID000000122736 BMID000000122737 BMID000000122738 BMID000000122739 BMID000000122740 BMID000000122741 BMID000000122742 BMID000000122743 BMID000000122744 BMID000000122745 BMID000000122746 BMID000000122747 BMID000000122748 BMID000000122749 BMID000000122750 BMID000000122751 BMID000000122752 BMID000000122753 BMID000000122754 BMID000000122755 BMID000000122756 BMID000000122757 BMID000000122758 BMID000000122759 .
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

SUBMITTER: Path2Models project 

PROVIDER: BMID000000142009 | biostudies-other |

SECONDARY ACCESSION(S): 24180668

REPOSITORIES: biostudies-other

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Publications

Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1.

Kawarabayasi Y Y   Hino Y Y   Horikawa H H   Yamazaki S S   Haikawa Y Y   Jin-no K K   Takahashi M M   Sekine M M   Baba S S   Ankai A A   Kosugi H H   Hosoyama A A   Fukui S S   Nagai Y Y   Nishijima K K   Nakazawa H H   Takamiya M M   Masuda S S   Funahashi T T   Tanaka T T   Kudoh Y Y   Yamazaki J J   Kushida N N   Oguchi A A   Kikuchi H H  

DNA research : an international journal for rapid publication of reports on genes and genomes 19990401 2


The complete sequence of the genome of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1, which optimally grows at 95 degrees C, has been determined by the whole genome shotgun method with some modifications. The entire length of the genome was 1,669,695 bp. The authenticity of the entire sequence was supported by restriction analysis of long PCR products, which were directly amplified from the genomic DNA. As the potential protein-coding regions, a total of 2,694 open reading fram  ...[more]

Publication: 1/2

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