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Iribe2006_CaMKIIkineticsModel


ABSTRACT:

This a model from the article:
Modulatory effect of calmodulin-dependent kinase II (CaMKII) on sarcoplasmicreticulum Ca2+ handling and interval-force relations: a modelling study.
Iribe G, Kohl P, Noble D. Philos Transact A Math Phys Eng Sci 2006 May 15;364(1842):1107-33 16608699 ,
Abstract:
We hypothesize that slow inactivation of Ca2+/calmodulin-dependent kinase II(CaMKII) and its modulatory effect on sarcoplasmic reticulum (SR) Ca2+ handlingare important for various interval-force (I-F) relations, in particular for thebeat interval dependency in transient alternans during the decay ofpost-extrasystolic potentiation. We have developed a mathematical model of asingle cardiomyocyte to integrate various I-F relations, including alternans, byincorporating a conceptual CaMKII kinetics model into the SR Ca2+ handlingmodel. Our model integrates I-F relations, such as the beat interval-dependenttwitch force duration, restitution and potentiation, positive staircasephenomenon and alternans. We found that CaMKII affects more or less all I-Frelations, and it is a key factor for integration of the various I-F relationsin our model. Alternans arises, in the model, out of a steep relation between SRCa2+ load and release, owing to SR load-dependent changes in the releasabilityof Ca2+ via the ryanodine receptor. Beat interval-dependent CaMKII activity,owing to its kinetic properties and amplifying effect on SR Ca2+ load dependencyof Ca2+ release, replicated the beat interval dependency of alternans, asobserved experimentally. Additionally, our model enabled reproduction of theeffects of various interventions on alternans, such as the slowing oraccelerating of Ca2+ release and/or uptake. We conclude that a slowtime-dependent factor, represented in the model by CaMKII, is important for theintegration of I-F relations, including alternans, and that our model offers auseful tool for further analysis of the roles of integrative Ca2+ handling inmyocardial I-F relations.

This model was taken from the CellML repository and automatically converted to SBML.
The original model was: Iribe G, Kohl P, Noble D. (2006) - version=1.0
The original CellML model was created by:
Penny Noble
penny.noble@dpag.ox.ac.uk
The University of Oxford

This model originates from BioModels Database: A Database of Annotated Published Models (http://www.ebi.ac.uk/biomodels/). It is copyright (c) 2005-2011 The BioModels.net Team.
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

In summary, you are entitled to use this encoded model in absolutely any manner you deem suitable, verbatim, or with modification, alone or embedded it in a larger context, redistribute it, commercially or not, in a restricted way or not. .

To cite BioModels Database, please use: Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Novère N, Laibe C (2010) BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst Biol., 4:92.

ORGANISM(S): Mammalia

SUBMITTER: Camille Laibe 

PROVIDER: MODEL1006230085 | biostudies-other |

SECONDARY ACCESSION(S): 16608699

REPOSITORIES: biostudies-other

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Publications

Modulatory effect of calmodulin-dependent kinase II (CaMKII) on sarcoplasmic reticulum Ca2+ handling and interval-force relations: a modelling study.

Iribe Gentaro G   Kohl Peter P   Noble Denis D  

Philosophical transactions. Series A, Mathematical, physical, and engineering sciences 20060501 1842


We hypothesize that slow inactivation of Ca2+/calmodulin-dependent kinase II (CaMKII) and its modulatory effect on sarcoplasmic reticulum (SR) Ca2+ handling are important for various interval-force (I-F) relations, in particular for the beat interval dependency in transient alternans during the decay of post-extrasystolic potentiation. We have developed a mathematical model of a single cardiomyocyte to integrate various I-F relations, including alternans, by incorporating a conceptual CaMKII kin  ...[more]

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