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Smallbone2013 - Serine biosynthesis


ABSTRACT:

Smallbone2013 - Serine biosynthesis

Kinetic modelling of metabolic pathways in application to Serine biosynthesis.

This model is described in the article:

Kieran Smallbone, Natalie J. Stanford
Methods in Molecular Biology. 2013; 985:113-121

Abstract:

In this chapter, we describe the steps needed to create a kinetic model of a metabolic pathway using kinetic data from both experimental measurements and literature review. Our methodology is presented by using the example of serine biosynthesis in E. coli.

As there are no plots to be reproduced as curation figure, table 6 and 7 that corresponds to steady state concentration of metabolite and steady state fluxes of reactions has been reproduced.

To the extent possible under law, all copyright and related orneighbouring rights to this encoded model have been dedicated to the publicdomain worldwide. Please refer to CC0 Public DomainDedication for more information.

ORGANISM(S): Escherichia coli

SUBMITTER: Lucian Smith 

PROVIDER: MODEL1203210000 | biostudies-other |

SECONDARY ACCESSION(S): 23417802

REPOSITORIES: biostudies-other

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Kinetic modeling of metabolic pathways: application to serine biosynthesis.

Smallbone Kieran K   Stanford Natalie J NJ  

Methods in molecular biology (Clifton, N.J.) 20130101


In this chapter, we describe the steps needed to create a kinetic model of a metabolic pathway using kinetic data from both experimental measurements and literature review. Our methodology is presented by using the example of serine biosynthesis in E. coli. ...[more]

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