Integration mapping of HybISS and scRNAseq data

ABSTRACT: Analysis pipeline of validation was used to define prediction scores using integration mapping method with level 2 annotations from scRNA-seq from Madissoon et al. as a reference dataset (https://satijalab.org/seurat/articles/integration_mapping). The dictionary of cell types was created to achieve matching cell type groups (Suppl. Data Excel 6 of Firsova et al.). Annotated cell types can be found in the web data viewer (https://adult-lung-iss.serve.scilifelab.se/).

ORGANISM(S): Homo sapiens (human)

SUBMITTER: Alexandra Firsova 

PROVIDER: S-BSST2189 | biostudies-other |

SECONDARY ACCESSION(S): S-BIAD2307

REPOSITORIES: biostudies-other