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Fusion discovery in breast cancer cell line

ABSTRACT: SnowShoes-FTD, a fusion transcript discovery tool, was used to identify fusions in breast cancer cell lines using the RNA-Seq data Total RNA extracted from cell lines. The total RNA was used for construction of RNA-Seq library for RNA-Sequencing.

ORGANISM(S): Homo sapiens

SUBMITTER: Asmann Yan

PROVIDER: S-ECPF-GEOD-52643 | biostudies-other |

REPOSITORIES: biostudies-other

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Fusion discovery in breast cancer cell line

Project description:SnowShoes-FTD, a fusion transcript discovery tool, was used to identify fusions in breast cancer cell lines using the RNA-Seq data Total RNA extracted from cell lines. The total RNA was used for construction of RNA-Seq library for RNA-Sequencing.

2013-11-22 | E-GEOD-52643 | biostudies-arrayexpress

Fusion discovery in breast cancer cell line

Project description:SnowShoes-FTD, a fusion transcript discovery tool, was used to identify fusions in breast cancer cell lines using the RNA-Seq data

2013-11-22 | GSE52643 | GEO

Structural analysis of the genome of breast cancer cell line ZR-75-30 identifies twelve expressed fusion genes.