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Microarray-Based Phospho-Proteomic Profiling of Complex Biological Systems.


ABSTRACT: Protein microarray technology has been successfully used for identifying substrates of purified activated kinases. We used protein microarrays to globally interrogate the effects of PTEN and Akt activity on the phospho-kinome of in vitro and in vivo glioma models and validated results in clinical pathological specimens. Whole cell lysates extracted from tumor samples can be applied to human kinome chip microarrays to profile the global kinase phosphorylation patterns in a high-throughput manner and identify novel substrates inherent to the tumor cell and the interactions with tumor microenvironment. Our findings identify a novel microarray-based method for assessing intracellular signaling events applicable to human oncogenesis and other pathophysiologic states.

SUBMITTER: Goodwin CR 

PROVIDER: S-EPMC4833893 | biostudies-other | 2016 Apr

REPOSITORIES: biostudies-other

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Microarray-Based Phospho-Proteomic Profiling of Complex Biological Systems.

Goodwin C Rory CR   Woodard Crystal L CL   Zhou Xin X   Pan Jianbo J   Olivi Alessandro A   Xia Shuli S   Bettegowda Chetan C   Sciubba Daniel M DM   Pevsner Jonathan J   Zhu Heng H   Laterra John J  

Translational oncology 20160401 2


Protein microarray technology has been successfully used for identifying substrates of purified activated kinases. We used protein microarrays to globally interrogate the effects of PTEN and Akt activity on the phospho-kinome of in vitro and in vivo glioma models and validated results in clinical pathological specimens. Whole cell lysates extracted from tumor samples can be applied to human kinome chip microarrays to profile the global kinase phosphorylation patterns in a high-throughput manner  ...[more]

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