HnRNP L-dependent protection of normal mRNAs from NMD subverts quality control in B cell lymphoma

ABSTRACT: The human nonsense-mediated mRNA decay pathway (NMD) performs quality control and regulatory functions within complex post-transcriptional regulatory networks. In addition to degradation-promoting factors, efficient and accurate detection of NMD substrates involves proteins that safeguard normal mRNAs. Here, we identify hnRNP L as a factor that protects mRNAs with NMD-inducing features including long 3'UTRs. Using biochemical and transcriptome-wide approaches, we provide evidence that the susceptibility of a given transcript to NMD can be modulated by its 3'UTR length and ability to recruit hnRNP L. Integrating these findings with the previously defined role of polypyrimidine tract binding protein 1 in NMD evasion enables enhanced prediction of transcript susceptibility to NMD. Unexpectedl

SUBMITTER: Dr. Aparna Kishor 

PROVIDER: S-SCDT-EMBOJ-2018-99128 | biostudies-other |

REPOSITORIES: biostudies-other