TRNA epitranscriptomics and biased codon are linked to proteome expression

ABSTRACT: Among components of the translational machinery, ribonucleoside modifications on tRNAs are emerging as critical regulators of cell physiology and stress response. Here we demonstrate highly coordinated behavior of the repertoire of tRNA modifications of Plasmodium falciparum throughout the intra-erythrocytic developmental cycle (IDC). We observed both a synchronized increase in 22 of 28 modifications from ring to trophozoite stage, consistent with tRNA maturation during translational up-regulation, and asynchronous changes in 6 modifications. Quantitative analysis of ~2100 proteins across the IDC revealed that up- and down-regulated proteins in late but not early stages have a marked codon bias that directly correlates with parallel changes in tRNA modifications and enhanced translational

SUBMITTER: Dr Chee, Sheng Ng 

PROVIDER: S-SCDT-MSB-17-8009 | biostudies-other |

REPOSITORIES: biostudies-other