Ischaemic sensitivity of human tissue by single cell RNA seq

ABSTRACT: Assessment of the effect of cold ischaemic time on single cell RNAseq data from human tissues using 10x Genomics 3' single cell RNA sequencing. This project contains data for spleen, oesophagus epithelium and lung parenchyma, three tissues that had previously been reported to have differential sensitivity to ischaemia. Samples were collected into Hypothermasol FRS hypothermic preservation media and dissociated fresh (as soon as possible) or at 12h, 24h, 72h post onset of cold ischaemia in the donor. Single cell and bulk RNA sequencing data was generated at each time point and whole genome sequencing was carried out for each donor.

SUBMITTER: Michael J Stubbington 

PROVIDER: S-SUBS3 | biostudies-other |

SECONDARY ACCESSION(S): SAMEA5690698

REPOSITORIES: biostudies-other