Dataset Information


Soil metagenome datasets underneath the Arecibo Observatory reflector dish.

ABSTRACT: The Arecibo Observatory (AO) located in Arecibo, Puerto Rico, is the most sensitive, powerful and active planetary radar system in the world [1]. One of its principal components is the 305 m-diameter spherical reflector dish (AORD), which is exposed to high frequency electromagnetic waves. To unravel the microbial communities that inhabit this environment, soil samples from underneath the AORD were collected, DNA extracted, and sequenced using Illumina MiSeq. Taxonomic and functional profiles were generated using the MG-RAST server. The most abundant domain was Bacteria (91%), followed by Virus (8%), Archaea (0.9%) and Eukaryota (0.9%). The most abundant phylum was Proteobacteria (54%), followed by Actinobacteria (8%), Bacteroidetes (5%) and Firmicutes (4%). In terms of functions, the most abundant among the metagenome corresponded to phages, transposable elements and plasmids (16%), followed by clustering-based subsystems (11%), carbohydrates (10%), and amino acids and derivatives (9%). This is the first soil metagenomic dataset from dish antennas and radar systems, specifically, underneath the AORD. Data can be used to explore the effect of high frequency electromagnetic waves in soil microbial composition, as well as the possibility of finding bioprospects with potential biomedical and biotechnological applications.

PROVIDER: S-EPMC6920479 | BioStudies |

REPOSITORIES: biostudies

Similar Datasets

| PRJNA564120 | ENA
| S-EPMC6196512 | BioStudies
| S-EPMC8449819 | BioStudies
2016-01-01 | S-EPMC4748258 | BioStudies
| S-EPMC4848539 | BioStudies
2017-01-01 | S-EPMC5684226 | BioStudies
| S-EPMC5853133 | BioStudies
| S-EPMC8638890 | BioStudies
| S-EPMC4819715 | BioStudies
| S-EPMC6446607 | BioStudies