Browse
Submit Data
Databases
API
Help

Dataset Information

6 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Construction of an accurate diagnosis system for colorectal cancer basing on omics research of intestinal microecosystem

ABSTRACT: Interventions: Gold Standard:Pathological diagnosis;Index test:Construction of an accurate diagnosis system for colorectal cancer basing on omics research of intestinal microecosystem Primary outcome(s): Intestinal flora Study Design: Factorial

DISEASE(S): Colorectal Cancer

PROVIDER: 2694490 | ecrin-mdr-crc |

REPOSITORIES: ECRIN MDR

ACCESS DATA

Json Xml

Similar Datasets

Construction of an accurate treatment system for colorectal cancer basing on omics research of intestinal microecosystem

Project description:Interventions: Gold Standard:Pathological diagnosis;Index test:Construct colorectal cancer virus omics artificial intelligence system basing on deep learning model Primary outcome(s): Intestinal flora;SEN, SPE, ACC, AUC of ROC Study Design: Factorial

| 2694487 | ecrin-mdr-crc

Construction of colorectal cancer genomics artificial intelligence system basing on deep learning model

Project description:Interventions: Gold Standard:Pathological diagnosis;Index test:Construction of colorectal cancer genomics artificial intelligence system basing on deep learning model Primary outcome(s): Gene expression;SEN, SPE, ACC, AUC of ROC Study Design: Factorial

| 2694323 | ecrin-mdr-crc

Construction of an intelligent system for prevention and treatment of colorectal cancer basing on big data analysis and deep learning model

Project description:Interventions: Gold Standard:Pathological diagnosis;Index test:Intelligent prevention and treatment system for colorectal cancer based on big data analysis and deep learning model. Primary outcome(s): Intestinal flora;SEN, SPE, ACC, AUC of ROC Study Design: Factorial

| 2693998 | ecrin-mdr-crc

Construction of an early warning system for colorectal cancer basing on the omics research of intestinal microecosystem

Project description:Interventions: Gold Standard:Pathological diagnosis;Index test:??????????????????????????? Primary outcome(s): Intestinal flora;SEN, SPE, ACC Study Design: Factorial

| 2694488 | ecrin-mdr-crc

DIRECT: Digital Microfluidics for Isolation-Free Shared Library Construction of Single-Cell DNA Methylome and Transcriptome

Project description:Integrated single-cell transcriptome and DNA methylome profiling has provided insight into the complex regulatory networks of cells. Existing methods are based on picking a single-cell and performing library construction in a tube, which is costly and cumbersome. Here, we propose DIRECT, a digital microfluidics-based method for simultaneous analysis of the methylome and transcriptome in a single library construction. The accuracy of DIRECT is demonstrated in comparison with bulk and single-omics data, and the high CpG site coverage of DIRECT allows for precise analysis of copy number variation information, enabling expansion of single cell analysis from two- to three-omics. By applying DIRECT to monitor the dynamics of mouse embryonic stem cell differentiation, the relationship between DNA methylation and changes in gene expression during differentiation was revealed. DIRECT enables accurate, robust, and reproducible single-cell DNA methylation and gene expression co-analysis at a lower cost and with greater efficiency, broadening the application scenarios of single-cell multi-omics analysis and revealing a more comprehensive and fine-grained map of cellular regulatory landscapes.

2023-08-10 | GSE240579 | GEO

Research and application of the intelligent system for early screening of colorectal cancer basing on microbiome

Project description:Interventions: Gold Standard:Pathologic diagnosis;Index test:Early Screening Intelligent Software Primary outcome(s): Intestinal flora;SEN, SPE, ACC Study Design: Non randomized control

| 2685781 | ecrin-mdr-crc

Development and application of key technologies of a novel early warning system for colorectal cancer basing on microbial characteristics

Project description:Interventions: Gold Standard:pathological examination;Index test:new colorectal cancer screening kit Primary outcome(s): Intestinal bacteria;Intestinal fungi;Intestinal virus Study Design: Sequential

| 2726246 | ecrin-mdr-crc

Construction of Reusable Plasmid Libraries for Strain Construction

Project description:Construction of Reusable Plasmid Libraries for Strain Construction

| PRJNA189258 | ENA

Multi-omics analysis revealing the interplay between gut microbiome and the host following opioid use [RNA-seq]

Project description:To uncover the role of opioid induced dysbiosis in disrupting intestinal homeostasis, we conducted a multi-omics analysis with gut microbial, metabolite and intestinal transcriptomics data

2023-08-30 | GSE230095 | GEO

Multi-omics analysis revealing the interplay between gut microbiome and the host following opioid use [ABX-RNA seq]

2023-08-30 | GSE230093 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data