Genomics

Dataset Information

0

EGAD00000000114


ABSTRACT: Whole transcriptome sequence data from 18 ovarian clear-cell carcinoma samples and one TOV21G ovarian clear-cell carcinoma cell line

PROVIDER: EGAD00000000114 | EGA |

REPOSITORIES: EGA

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Publications

ARID1A mutations in endometriosis-associated ovarian carcinomas.

Wiegand Kimberly C KC   Shah Sohrab P SP   Al-Agha Osama M OM   Zhao Yongjun Y   Tse Kane K   Zeng Thomas T   Senz Janine J   McConechy Melissa K MK   Anglesio Michael S MS   Kalloger Steve E SE   Yang Winnie W   Heravi-Moussavi Alireza A   Giuliany Ryan R   Chow Christine C   Fee John J   Zayed Abdalnasser A   Prentice Leah L   Melnyk Nataliya N   Turashvili Gulisa G   Delaney Allen D AD   Madore Jason J   Yip Stephen S   McPherson Andrew W AW   Ha Gavin G   Bell Lynda L   Fereday Sian S   Tam Angela A   Galletta Laura L   Tonin Patricia N PN   Provencher Diane D   Miller Dianne D   Jones Steven J M SJ   Moore Richard A RA   Morin Gregg B GB   Oloumi Arusha A   Boyd Niki N   Aparicio Samuel A SA   Shih Ie-Ming IeM   Mes-Masson Anne-Marie AM   Bowtell David D DD   Hirst Martin M   Gilks Blake B   Marra Marco A MA   Huntsman David G DG  

The New England journal of medicine 20100908 16


<h4>Background</h4>Ovarian clear-cell and endometrioid carcinomas may arise from endometriosis, but the molecular events involved in this transformation have not been described.<h4>Methods</h4>We sequenced the whole transcriptomes of 18 ovarian clear-cell carcinomas and 1 ovarian clear-cell carcinoma cell line and found somatic mutations in ARID1A (the AT-rich interactive domain 1A [SWI-like] gene) in 6 of the samples. ARID1A encodes BAF250a, a key component of the SWI–SNF chromatin remodeling c  ...[more]

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