Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

EGAS00001000426-sc-20130904 - samples

ABSTRACT: We propose to definitively characterise the somatic genetics of Triple negative breast cancer through generation of comprehensive catalogues of somatic mutations in 500 cases by high coverage genome sequencing coupled with integrated transcriptomic and methylation analyses. This study will use a bespoke bait set to pulldown regions of interest found in whole genome sequencing to validate mutations found.

PROVIDER: EGAD00001000662 | EGA |

REPOSITORIES: EGA

ACCESS DATA

Json Xml

Similar Datasets

Triple Negative Breast Cancer Whole Genome Validations

Project description:We propose to definitively characterise the somatic genetics of Triple negative breast cancer through generation of comprehensive catalogues of somatic mutations in 500 cases by high coverage genome sequencing coupled with integrated transcriptomic and methylation analyses. This study will use a bespoke bait set to pulldown regions of interest found in whole genome sequencing to validate mutations found.

| EGAS00001000426 | EGA

Triple Negative Breast Cancer RNA Sequencing

Project description:We propose to definitively characterise the somatic genetics of triple negative breast cancer through generation of comprehensive catalogues of somatic mutations in breast cancer cases by high coverage genome sequencing coupled with integrated transcriptomic and methylation analyses.

2015-04-16 | E-ERAD-113 | biostudies-arrayexpress

Breast Cancer FRT RNA seq

Project description:We propose to definitively characterise the somatic genetics of ER+ve, HER2-ve breast cancer through generation of comprehensive catalogues of somatic mutations in breast cancer cases by high coverage genome sequencing coupled with integrated transcriptomic and methylation analyses.

2013-01-30 | E-ERAD-145 | biostudies-arrayexpress

EGAS00001000427-sc-20130626 - samples

Project description:We propose to definitively characterise the somatic genetics of Prostate cancer through generation of comprehensive catalogues of somatic mutations by high coverage genome sequencing. This study will aim to validate the findings of the whole genome study by re-sequencing regions of interest using a bespoke pulldown bait. See ICGC website for more information: http://icgc.org/icgc/cgp/70/508/71331

| EGAD00001000621 | EGA

Prostate Cancer Whole Genome Validations

| EGAS00001000427 | EGA

20 Matched Pair Breast Cancer Genomes

Project description:We propose to definitively characterise the somatic genetics of 20 breast cancers through generation of comprehensive catalogues of somatic mutations by high coverage genome sequencing coupled with integrated transcriptomic data.

| EGAS00001000170 | EGA

RNAseq Pulldown

| EGAS00001000230 | EGA

EGAS00001000377-sc-20150416 - samples

Project description:We propose to definitively characterise the somatic genetics of breast cancer through generation of comprehensive catalogues of somatic mutations in breast cancer cases by high coverage genome sequencing coupled with integrated transcriptomic and methylation analyses.

| EGAD00001001339 | EGA

EGAS00001000707-sc-20150416-1 - samples

| EGAD00001001340 | EGA

EGAS00001000310-sc-20121129 - samples

| EGAD00001000285 | EGA