Genomics

Dataset Information

0

Uromol_RNA_Dataset_unmap - samples

ABSTRACT: Un-mapped whole transcriptome RNA-Seq data from 476 human samples of early stage urothelial carcinoma.

PROVIDER: EGAD00001001940 | EGA |

REPOSITORIES: EGA

Json Xml
altmetric image

Publications

Comprehensive Transcriptional Analysis of Early-Stage Urothelial Carcinoma.

Hedegaard Jakob J   Lamy Philippe P   Nordentoft Iver I   Algaba Ferran F   Høyer Søren S   Ulhøi Benedicte Parm BP   Vang Søren S   Reinert Thomas T   Hermann Gregers G GG   Mogensen Karin K   Thomsen Mathilde Borg Houlberg MBH   Nielsen Morten Muhlig MM   Marquez Mirari M   Segersten Ulrika U   Aine Mattias M   Höglund Mattias M   Birkenkamp-Demtröder Karin K   Fristrup Niels N   Borre Michael M   Hartmann Arndt A   Stöhr Robert R   Wach Sven S   Keck Bastian B   Seitz Anna Katharina AK   Nawroth Roman R   Maurer Tobias T   Tulic Cane C   Simic Tatjana T   Junker Kerstin K   Horstmann Marcus M   Harving Niels N   Petersen Astrid Christine AC   Calle M Luz ML   Steyerberg Ewout W EW   Beukers Willemien W   van Kessel Kim E M KEM   Jensen Jørgen Bjerggaard JB   Pedersen Jakob Skou JS   Malmström Per-Uno PU   Malats Núria N   Real Francisco X FX   Zwarthoff Ellen C EC   Ørntoft Torben Falck TF   Dyrskjøt Lars L  

Cancer cell 20160616 1

Non-muscle-invasive bladder cancer (NMIBC) is a heterogeneous disease with widely different outcomes. We performed a comprehensive transcriptional analysis of 460 early-stage urothelial carcinomas and showed that NMIBC can be subgrouped into three major classes with basal- and luminal-like characteristics and different clinical outcomes. Large differences in biological processes such as the cell cycle, epithelial-mesenchymal transition, and differentiation were observed. Analysis of transcript v  ...[more]

Similar Datasets

Genomics Uromol_RNA_Dataset_map - samples
| EGAD00001001939 | EGA
Genomics Uromol_RNA_Dataset_vcf - samples
| EGAD00001001941 | EGA
Transcriptomics Comprehensive Transcriptional Analysis of Early Stage Urothelial Carcinoma using whole transcriptome sequencing
2016-06-17 | E-MTAB-4321 | biostudies-arrayexpress
Genomics Comprehensive Transcriptional Analysis of Early Stage Urothelial Carcinoma using whole transcriptome sequencing
| EGAS00001001236 | EGA
Transcriptomics Epigenetic regulation of mammalian Hedgehog signaling to the stroma determines the molecular subtype of human bladder cancer
2019-04-09 | GSE129441 | GEO
Genomics Molecular changes during progression from early stage to advanced urothelial carcinoma
| PRJNA529496 | ENA
Genomics scRNAseq of Human Urothelial Carcinoma
| PRJNA1010448 | ENA
Genomics scRNAseq of Human Urothelial Carcinoma
| PRJNA1010449 | ENA
Transcriptomics RNA-seq data from naturally-occurring early canine urothelial carcinoma detected through screening of dogs in a high-risk breed (Scottish Terriers)
2025-03-23 | GSE199292 | GEO
Transcriptomics Transcriptomes of human bladder cells and cells in bladder cancer
2011-07-09 | E-GEOD-30522 | biostudies-arrayexpress