Genomics

Dataset Information

0

Riken_moim_wgs_13 - samples

ABSTRACT: RIKEN collection of WGS reads for 13 multicentric liver cancers or intrahepatic metastasis and matched blood samples for 12 donors.

PROVIDER: EGAD00001001996 | EGA |

REPOSITORIES: EGA

Json Xml
altmetric image

Publications

<h4>Background</h4>Hepatocellular carcinoma (HCC) is a heterogeneous disease with high mortality rate. Recent genomic studies have identified TP53, AXIN1, and CTNNB1 as the most frequently mutated genes. Lower frequency mutations have been reported in ARID1A, ARID2 and JAK1. In addition, hepatitis B virus (HBV) integrations into the human genome have been associated with HCC.<h4>Results</h4>Here, we deep-sequence 42 HCC patients with a combination of whole genome, exome and transcriptome sequenc  ...[more]

PMID: 25159915

Publication: 1/2

Similar Datasets

Genomics riken_wgs_mc_im_hcc - samples
| EGAD00001001643 | EGA
Genomics riken_ncc_rnaseq_458 - samples
| EGAD00001001880 | EGA
Genomics riken_wgs_hcc270 - samples
| EGAD00001001642 | EGA
Genomics icgc-liri-jp_lcb - samples
| EGAD00001000809 | EGA
Genomics rnaseq-22hcc - samples
| EGAD00001001035 | EGA
Genomics riken_wgs_800 - samples
| EGAD00001001881 | EGA
Transcriptomics Solute carrier family 12 member 5 promotes tumor development of intrahepatic cholangiocarcinoma
2023-02-01 | GSE220911 | GEO
Transcriptomics Epigenetic and transcriptomic signature of aging in human liver [expression]
2018-09-11 | E-GEOD-107037 | biostudies-arrayexpress
Genomics icgc-liri-jp_release15 - samples
| EGAD00001000808 | EGA
Genomics icgc-liri-jp_release16 - samples
| EGAD00001000842 | EGA