Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E7615607-6fc7-4554-ada1-4b94da3f5484 - samples

ABSTRACT: Single cell WGS (low pass) for PT1-derived PDX samples

PROVIDER: EGAD00001006137 | EGA |

REPOSITORIES: EGA

ACCESS DATA

Json Xml

Similar Datasets

Low-pass WGS of hiPSC and hEGCLC samples of CTL08A genotype

Project description:Low-pass whole genome sequencing (WGS) of one sample of human induced pluripotent stem cells (hiPSCs) derived from the CTL08A male cell line and three samples of CTL08A human embryonic germ cell-like cells (hEGCLCs) at passage 10 after hPGCLC-hEGCLC conversion.

2026-02-10 | E-MTAB-15528 | biostudies-arrayexpress

b0be717c-8e7a-45e5-bdb3-560c6643bca6 - samples

Project description:Single cell RNA-seq for PT1-derived PDX samples

| EGAD00001006134 | EGA

Non-small Cell Lung Cancer Brain Metastasis Atlas [single nuclei RNAseq]

Project description:We performed single nuclei RNA-sequencing (snRNA-seq) with matched T cell receptor sequencing (TCR-seq), and pool matched low pass whole genome sequencing (WGS) of 12 treatment-naïve non-small cell lung cancer (NSCLC) primary tumors (PTs) and 31 treatment-naïve NSCLC brain metastases (BMs) . In total, we recovered 277,206 cell transcriptomes in 43 samples.

2025-01-17 | GSE223499 | GEO

Non-small Cell Lung Cancer Brain Metastasis Atlas [lpWGS]

2025-01-17 | GSE223502 | GEO

Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq]

Project description:We performed single nuclei RNA-sequencing (snRNA-seq) with matched T cell receptor sequencing (TCR-seq), pool matched low pass whole genome sequencing (WGS) and single-cell spatial transcriptomics of 12 treatment-naïve non-small cell lung cancer (NSCLC) primary tumors (PTs) and 31 treatment-naïve NSCLC brain metastases (BMs) . In total, we recovered 277,206 cell transcriptomes in 43 samples. We performed matched spatial sequencing using SlideSeq2 on 14 snRNA-seq samples.

2025-01-17 | GSE223501 | GEO

f4f63cff-78f3-4772-bffd-42fe17b64c72 - samples

Project description:Single cell WGS (low pass) for primary samples

| EGAD00001006138 | EGA

Profiling of Sarcomas from Archival Tissues [snRNA-Seq]

Project description:We performed single nuclei RNA-sequencing (snRNA-seq) with matched T cell receptor sequencing (TCR-seq), and pool matched low pass whole genome sequencing (WGS) of eight specimens from six patients, encompassing four undifferentiated polymorphic sarcomas (UPS) and four intimal sarcomas (INS), and paired specimens from two patients (one UPS and INS each) treated with immune checkpoint blockade (ICB).

2024-06-21 | GSE243380 | GEO

Profiling of Sarcomas from Archival Tissues [TCR-Seq]

Project description:We performed single nuclei RNA-sequencing (snRNA-seq) with matched T cell receptor sequencing (TCR-seq), and pool matched low pass whole genome sequencing (WGS) of eight specimens from six patients, encompassing four undifferentiated polymorphic sarcomas (UPS) and four intimal sarcomas (INS), and paired specimens from two patients (one UPS and INS each) treated with immune checkpoint blockade (ICB).

2024-06-21 | GSE243379 | GEO

Profiling of Sarcomas from Archival Tissues [lp-WGS]

Project description:We performed single nuclei RNA-sequencing (snRNA-seq) with matched T cell receptor sequencing (TCR-seq), and pool matched low pass whole genome sequencing (WGS) of eight specimens from six patients, encompassing four undifferentiated polymorphic sarcomas (UPS) and four intimal sarcomas (INS), and paired specimens from two patients (one UPS and INS each) treated with immune checkpoint blockade (ICB).

2024-06-21 | GSE243377 | GEO

7edc7be6-8e75-4517-98ba-0dc34333b6a7 - samples

Project description:Single cell WGS (low pass) for chord blood samples

| EGAD00001006136 | EGA