Project description:Raw data files for the German Epigenome Project (DEEP), IHEC/EpiRR submission of 2017.
metadata available at: http://deep.dkfz.de/#/experiments
Project description:Additional sequencing data for the German IHEC contribution (DEEP, http://deep.dkfz.de/, http://www.deutsches-epigenom-programm.de/).
This is the additional data released in August 2016.
Contains datatypes:
- Whole Genome Bisulfite sequencing
- ChipSeq (H3K27ac, H3K27me3, H3K36me3, H3K4me1, H3K4me3, H3K9me3, Input)
- tRNA – not unmapped
- mRNA
- snRNA
- Dnase Hypersensitive sites
- RRBS
- NOMe
Project description:This GEO submission contains processed bulk RNA sequencing data generated from pleural mesothelioma tumors and comparator pleural specimens. Raw sequencing data are available through controlled access in dbGaP under accession phs004285. Processed gene expression matrices and sample-level metadata for the bulk RNA-seq libraries are provided in this submission.
Project description:This GEO submission contains processed single-cell RNA sequencing data generated using the Seq-Well platform from pleural mesothelioma tumors and comparator pleural specimens. Raw sequencing data are available through controlled access in dbGaP under accession phs004285. Processed expression matrices and cell-level metadata for the single-cell libraries are provided in this submission.
Project description:Regions of common inter-individual DNA methylation differences in human monocytes – potential function and genetic basis
WGBS Data of Samples:
43_Hm03_BlMo_Ct, 43_Hm02_BlMo_Ct, 43_Hm05_BlMo_Ct, 43_Hm01_BlMo_Ct
For details about sequencing or sample metadata check http://deep.dkfz.de/
