Genomics

Dataset Information

0

Variant set of 29 maize lines


ABSTRACT: Set of variants detected using PacBio HiFi long reads, for 29 maize lines within the framework of the SeqOccIn project. SNPs were detected using deepvariant, and structural variants using Sniffles. Zea mays B73v4 was used as a reference.

INSTRUMENT(S): -

ORGANISM(S): Zea Mays

SUBMITTER: INRAE – GeT-PlaGe;INRAE 

PROVIDER: PRJEB106599 | EVA | 2026-01-19

REPOSITORIES: EVA

Dataset's files

Source:
Action DRS
A632-SV-sniffles.accessioned.vcf.gz Vcf
A632-SV-sniffles.accessioned.vcf.gz.csi Vcf
A632-SV-sniffles.vcf.csi Other
A632-SV-sniffles.vcf.gz Vcf
Items per page:
1 - 4 of 4

Similar Datasets

2012-09-14 | GSE38414 | GEO
2012-09-14 | GSE38413 | GEO
2010-10-15 | E-GEOD-23756 | biostudies-arrayexpress
2006-04-14 | GSE4663 | GEO
2012-09-14 | E-GEOD-38414 | biostudies-arrayexpress
2020-03-22 | GSE132167 | GEO
2010-10-15 | GSE23756 | GEO
2017-06-13 | GSE87451 | GEO
2022-03-02 | GSE193292 | GEO
2012-09-14 | E-GEOD-38413 | biostudies-arrayexpress