Genomics

Dataset Information

0

Genomic sequencing and analysis of the indigenous Land Race Vellai Kowwni rice-Partial


ABSTRACT: Vellai Kowni is an indigenous and underexplored traditional rice variety of Indian origin, known for its distinct aroma, sticky grain texture, and potential medicinal properties. In this study, whole-genome sequencing and comparative genomic analysis were performed on traditional rice varieties, including Vellai Kowni (VK) and Malumudingi (MM), with Seeraga Samba (SS) as a reference. The study aims to identify genetic variations, functional genes, and metabolic pathways associated with important biological traits such as stress tolerance and bioactive properties. Additionally, uncharacterized genes were analyzed to explore potential novel functional candidates contributing to the unique characteristics of these varieties. .

Contributors: Sathiyapriya Kamatchi, Aparna Mahadevan, Jayavarman M, Madheswaran Madhavan

INSTRUMENT(S): -

ORGANISM(S): Oryza Sativa

SUBMITTER: Thiagarajar College 

PROVIDER: PRJNA1438125 | EVA | 2026-03-18

REPOSITORIES: EVA

Dataset's files

Source:
Action DRS
MM.snps.ann.accessioned.vcf.gz Vcf
MM.snps.ann.accessioned.vcf.gz.csi Vcf
MM.snps.ann.vcf.csi Other
MM.snps.ann.vcf.gz Vcf
VK.snps.ann.accessioned.vcf.gz Vcf
Items per page:
1 - 5 of 8

Similar Datasets

2020-10-01 | GSE152572 | GEO
2018-12-20 | GSE117170 | GEO
2021-04-27 | GSE173301 | GEO
2020-04-27 | PXD018338 | Pride
2011-12-31 | GSE29967 | GEO
2017-02-09 | GSE71925 | GEO
2008-05-10 | GSE9653 | GEO
2016-11-25 | MTBLS151 | MetaboLights
2020-12-21 | PXD014669 | Pride
2023-11-08 | PXD046188 | Pride