Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

ABSTRACT: we generated developmental and tissue-specific 3'-seq libraries from D. yakuba and D. virilis to study the role of alternative polyadenylation across Drosophila species

OTHER RELATED OMICS DATASETS IN: PRJNA394978

ORGANISM(S): Drosophila yakuba Drosophila virilis Drosophila melanogaster

PROVIDER: GSE101603 | GEO | 2017/10/31

SECONDARY ACCESSION(S): PRJNA394978

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species.

Project description: Not available

| S-EPMC5707805 | biostudies-literature

RNA profiling in Drosophila virilis and Drosophila yakuba

Project description:Gene annoation and determination of gene expression levels in Drosophila virilis and Drosophila yakuba by deep sequencing. Total RNA-seq data from heads of 2-5 day old mated D virilis and D yakuba females, 1 sample from each species.

2015-01-29 | E-GEOD-61222 | biostudies-arrayexpress

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Project description:Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

| PRJNA394978 | ENA

RNA profiling in Drosophila virilis and Drosophila yakuba

Project description:Gene annoation and determination of gene expression levels in Drosophila virilis and Drosophila yakuba by deep sequencing.

2015-01-29 | GSE61222 | GEO

Profiling of sex-biased expression in Drosophila species

Project description:Extensive sex-biased expression has been seen in multiple surveys D. melanogaster. We were interested in broadly sampling sex-biased expression of orthologs and species- or lineage-specific genes in the Drosophila genus. To appropriately assay gene expression in multiple species, we used custom microarrays designed against each of six species that broadly sample the phylogenetic space represented by the newly completed genomes (D. simulans, D. yakuba, D. ananassae, D. pseudoobscura, D. virilis and D. mojavensis) and an array designed against D. melanogaster to determine the overall patterns of sex-biased expression in those species and their chromosome linkage. Keywords: other

2007-11-08 | GSE6640 | GEO

Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression (part 1)

Project description:We sequenced mRNA from blastoderm embryos of Drosophila melanogaster, Drosophila yakuba, Drosophila pseudoobscura and Drosophila virilis. Two samples contain pooled mRNA from several species, and the remaining 24 samples contain mRNA from a single species. Methods: Retinal mRNA profiles of Blastoderm embryos

2013-09-12 | GSE50766 | GEO