Transcriptomics,Genomics

Dataset Information

161

Single cell analysis reveals cancer cell heterogeneities in hepatocellular carcinoma [SMART-seq]


ABSTRACT: Combined transcriptomic and functional analyses of HCC cells at single-cell level were performed to assess CSC heterogeneity. Overall design: Single-cell transcriptome analyses of two HCC cell lines (HuH-1 and HuH-7) and one patient-derived circulating tumor cells by using SMART-Seq protocol ***Due to patient privacy concerns, the submitter declares that patient data will be submitted to dbGaP.***

INSTRUMENT(S): Illumina HiSeq 2500 (Homo sapiens)

SUBMITTER: Xin Wei Wang  

PROVIDER: GSE103866 | GEO | 2018-06-11

REPOSITORIES: GEO

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Publications


Intratumor molecular heterogeneity of hepatocellular carcinoma is partly attributed to the presence of hepatic cancer stem cells (CSCs). Different CSC populations defined by various cell surface markers may contain different oncogenic drivers, posing a challenge in defining molecularly targeted therapeutics. We combined transcriptomic and functional analyses of hepatocellular carcinoma cells at the single-cell level to assess the degree of CSC heterogeneity. We provide evidence that hepatic CSCs  ...[more]

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