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A practical evaluation of alignment algorithms for RNA variant calling analysis

ABSTRACT: We performed RNA-seq with ten pieces of breast cancer (invasive ductal carcinoma; luminal B type) tissue and three pieces of adjacent normal tissue from a single patient. These RNA-seq data were used to evaluate the performance of splice-aware aligners.

ORGANISM(S): Homo sapiens

PROVIDER: GSE110114 | GEO | 2018/02/06

REPOSITORIES: GEO

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