Genomics

Dataset Information

0

Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [sRNA-Seq]

ABSTRACT: We performed Illumina sequencing of sRNA libraries prepared from 10-day-old seedlings in Arabidopsis. SE is a key component in miRNA processing and pre-mRNA splicing, whereas ATXR5/6 is engaged in epigenetic silencing. Genome-wide sRNA sequencing revealed that ATXR5/6 did not participate in SE-mediated miRNA biogenesis.

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE111813 | GEO | 2018/06/26

REPOSITORIES: GEO

Json Xml

Similar Datasets

Genomics Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [ChIP-Seq]
2018-06-26 | GSE111811 | GEO
Methylation profiling Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [Bisulfite-Seq]
2018-06-26 | GSE111742 | GEO
Transcriptomics Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
2018-06-26 | GSE111812 | GEO
Genomics Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [sRNA-Seq]
| PRJNA438241 | ENA
Genomics Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression
| PRJNA438235 | ENA
Genomics Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [ChIP-Seq]
| PRJNA438239 | ENA
Genomics Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
| PRJNA438240 | ENA
Genomics Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [Bisulfite-Seq]
| PRJNA438055 | ENA
Methylation profiling Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression
2018-06-26 | GSE111814 | GEO
Transcriptomics sRNA-seq of Brachypodium distachyon roots inoculated with Serendipita indica (syn. Piriformospora indica)
2021-07-15 | E-MTAB-10650 | biostudies-arrayexpress