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Gene expression changes in galls at 21 dai and corresponding uninfected roots from Poplar CAD and WT lines

ABSTRACT: Illumina technology was used to generate mRNA profiles of galls from root-knot nematodes infected and corresponding uninfected roots from Poplar CAD and WT lines. RNA was extracted from 3 replicates.TruSeq mRNA Stranded libraries were constructed and after pooling and normalization of libraries, sequencing was done on a NextSeq500 Sequencing System. Raw reads were trimmed for quality and mapped to the substituted genome sequence of P. tremula x P. alba 717-1B4 using CLC Genomics Workbench v9.5.2 and the primary transcripts only.

ORGANISM(S): Populus tremula x Populus alba

PROVIDER: GSE112673 | GEO | 2019/01/15

REPOSITORIES: GEO

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