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Omics score: 48

Developmental timecourse of C. elegans small RNAs with 5p monophosphates

ABSTRACT: These datasets profile the expression of small RNAs with 5p monophosphates and 3p hydroxyls (including miRNAs, 21U-RNAs) across C. elegans development and in dauer, glp-4 mutant, and mixed-stage wt worms. These datasets were prepared in the David P. Bartel laboratory using T4 RNA ligase Rnl2(1-249). Keywords: miRNA and 21U-RNA discovery and developmental expression profiling Overall design: CE-devProfile-5pDependent-Illumina 1 flowcell each for Embryo, L1, L2, L3, L4, Adult, Dauer, Glp-4 mutant; 6 flowcells mixed stage

INSTRUMENT(S): MIT Caenorhabditis elegans small RNA sequences (Illumina/Solexa)

ORGANISM(S): Caenorhabditis elegans

SUBMITTER: James Graham Ruby

PROVIDER: GSE11734 | GEO | 2008-06-16

SECONDARY ACCESSION(S): PRJNA109167

REPOSITORIES: GEO

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Developmental timecourse of C. elegans small RNAs with 5p monophosphates

Project description:These datasets profile the expression of small RNAs with 5p monophosphates and 3p hydroxyls (including miRNAs, 21U-RNAs) across C. elegans development and in dauer, glp-4 mutant, and mixed-stage wt worms. These datasets were prepared in the David P. Bartel laboratory using T4 RNA ligase Rnl2(1-249). Keywords: miRNA and 21U-RNA discovery and developmental expression profiling CE-devProfile-5pDependent-Illumina 1 flowcell each for Embryo, L1, L2, L3, L4, Adult, Dauer, Glp-4 mutant; 6 flowcells mixed stage

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