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SMARTer single cell total RNA sequencing [SK-N-BE-2C]

ABSTRACT: single cell polyA+ and total RNA-seq data was generated for NGP, SK-N-BE-2C and SHSY5Y-MYCN-TR cells

ORGANISM(S): Homo sapiens

PROVIDER: GSE119983 | GEO | 2019/01/01

REPOSITORIES: GEO

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Expression data from 2C::tomato+ vs 2C::tomato - ES cells

Project description:We compared gene expression from 2C::tomato+/- ES cells from Kdm1a wt and mutant ES cultures 2C::tomato- samples 1, 5, 9 2C::tomato+ samples 2, 6, 10 We collecteded 3 replicates of RNA from 2C::tomato+ and - ES cells

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mRNA expression profiles of SK-N-AS neuroblastoma cells with induced ALK-wt, ALK-F1174L or ALK-R1275Q

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Differential gene expression tools exhibit substandard performance for long non-coding RNA-sequencing data

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polyA mRNA RNA-seq from SK-N-SH (ENCSR000BYL)

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Project description:We identified/quantified genes and repeat elements enriched within 2C::tomato+ cells vs. 2C::tomato - cells 2C::tomato + and - cells were collected by FACS for RNA-Seq analysis

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