Genomics

Dataset Information

0

Requirements for multivalent Yb body assembly in transposon silencing in Drosophila


ABSTRACT: Female sterile (1) Yb (Yb) is a primary component of Yb bodies, perinuclear foci known as the site of PIWI-interacting RNA (piRNA) biogenesis in Drosophila ovarian somatic cells. Yb consists of Helicase C-terminal (Hel-C), RNA helicase and extended Tudor (eTud) domains. We previously showed that the RNA helicase domain is necessary for Yb−RNA interaction, Yb body formation and piRNA biogenesis. Here, we investigated the functions of the two other domains and found that Hel-C and eTud are necessary for Yb to self-associate and to interact with RNAs and other Yb body components, respectively. Both domains were essential for Yb body formation and transposon silencing. Without eTud, piRNA production was completely impaired. Loss of Hel-C severely reduced the levels of transposon-targeting piRNAs, although genic piRNAs unrelated to transposon silencing were still produced. Similar phenotypes were observed when mutations in flamenco, the primary source of transposon-targeting piRNAs, led to the expression of attenuated RNAs. Yb bodies are liquid-like multivalent condensates whose assembly depends on Yb self-association and widespread Yb−flamenco RNA binding.

ORGANISM(S): Drosophila melanogaster

PROVIDER: GSE121605 | GEO | 2019/04/29

REPOSITORIES: GEO

Similar Datasets

2014-06-24 | E-GEOD-54875 | biostudies-arrayexpress
2014-06-24 | GSE54875 | GEO
2011-02-10 | E-GEOD-26407 | biostudies-arrayexpress
2010-10-03 | E-GEOD-23560 | biostudies-arrayexpress
2010-10-04 | GSE23560 | GEO
2019-03-28 | GSE128924 | GEO
2019-03-29 | GSE126016 | GEO
2011-02-10 | GSE26407 | GEO
2021-04-15 | PXD019670 | Pride
2021-07-02 | PXD019674 | Pride