Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Biotic stress-induced priming and de-priming of transcriptional memory in apple.

ABSTRACT: In order to identify primed (and memorized) genes resulting from BTH and/ or flg22 application, we performed a series of microarray-based transcription profiles. 14 days after propagation plants were treated the first time with the indicated treatment and second time 17 days after propagation with the indicated treatment. Plants were harvested and RNA was extracted 31 days after propagation. BTH was applied as formulated compound Bion. The sample name reflects the treatment order. Samples with the name water_water are control treatments which were treated 14 and 17 days after propaghation with water. The sample with the name Bion_flg22 was treated 14 days after germination with BTH and 17 days after germination flg22.

ORGANISM(S): Malus domestica

PROVIDER: GSE123072 | GEO | 2018/12/04

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Biotic stress-induced priming and de-priming of transcriptional memory in Arabidopsis

Project description:In order to identify primed (and memorized) genes resulting from BTH and/ or flg22 application, we performed a series of microarray-based transcription profiles. 7 days after germination Arabidopsis plants were treated the first time with the indicated treatment and second time 10 days after germination with the indicated treatment. Plants were harvested and RNA was extracted 21 days after germination. BTH was applied as formulated compound Bion. The sample name reflects the treatment order. Samples with the name water_water are control treatments which were treated 7 and 10 days after germination with water. The sample with the name Bion_flg22 was treated 7 days after germination with BTH and 10 days after germination flg22.

2018-12-04 | GSE123073 | GEO

WRKY45-dependent rice genes

2012-12-26 | GSE23733 | GEO

WRKY45-dependent rice genes

Project description:WRKY45-dependent rice genes: Mock- and benzothiadiazole (BTH)-treated wild-type (Nipponbare NB) rice and mock- and BTH-treated WRKY45-knockdown (W45-kd) rice (line #15) were analyzed in four biological replicates at 12 and 24 h after the treatment. Mock- and benzothiadiazole (BTH)-treated wild-type (Nipponbare NB) rice and mock- and BTH-treated WRKY45-knockdown (W45-kd) rice (line #3) were analyzed in four biological replicates at 24 h after the treatment. Mock- and benzothiadiazole (BTH)-treated wild-type (Nipponbare NB) rice and mock- and BTH-treated WRKY45-knockdown (W45-kd) rice (line #15) were analyzed in four biological replicates at 12 and 24 h after the treatment. Mock- and benzothiadiazole (BTH)-treated wild-type (Nipponbare NB) rice and mock- and BTH-treated WRKY45-knockdown (W45-kd) rice (line #3) were analyzed in four biological replicates at 24 h after the treatment.

2012-12-26 | E-GEOD-23733 | biostudies-arrayexpress

Bean leaves treated with benzothiadiazole (BTH)

Project description:Bean leaves treated with BTH or water. 126 = control R1, 127 = BTH R1, 128 = control R2, 129 = BTH R2, 130 = control R3, 131 = BTH R3

2019-07-31 | MSV000084162 | MassIVE

mpk6 flg22 - Flagellin response in mpk mutants

Project description:au-09-01_mpk_flagellin_edu - mpk6 flg22 - Investigate flagellin mpk dependent genes - 2 weeks mpk6 flg22 treated 1h with 1 microM flg22. Keywords: treated vs untreated comparison

2012-01-01 | GSE23193 | GEO

Modulation of apple leaf trancriptome by Acibenzolar-S-methyl (ASM)

Project description:Investigation of whole genome gene expression level changes in leaves of apple seedlings (Golden delicious) 3 days after treatment by Bion 50WG (ASM) versus water.

2024-04-01 | GSE262538 | GEO

No-Transcriptional impact of Cd-induced nitric oxide synthesis

Project description:rs05-08_no - no - Cadmium treatment induces slow but long lasting nitric oxide production in plant tissues. This NO production can be suppressed using the commonly used Nitric Oxide Synthase inhibitor L-NAME. This inhibitor tends to partially alleviate Cd toxicity. This effect is correlated with a strong diminution of Cd content in roots of plants treated both with Cd and L-NAME compared to roots from plants treated with Cd only. The main goal of this study is the identification of transcriptionnal changes caused by Cd-induced nitric oxide, and that could potentially result in enhanced Cd root accumulation. - Germination of surface sterilized seeds was performed on solid MS/2 medium. After 2 weeks, the young plantlets were placed on sand for an additional 3 week period in a controlled environment (8 h photoperiod of 300 umol m-2 s-1, 22degreeC, 70% relative humidity) . Plants of similar rosette diameters were then transfered to an hydroponic culture using the nutritive solution described in [Gravot et al. 2004 FEBS Letters 561:22-28] for an acclimation of 3 days. L-NAME and cadmium treatments were respectively started 1 and 2 hours after the start of illumination and root tissues were collected 24 h later and immediatly frozen in liquid nitrogen before RNA extraction. Treatments were : 1 : control 2 : L-NAME 5 mM 3 : Cd 30 uM 4 : L-NAME 5mM + Cd 30 uM 5 : Cd 15 uM For each condition, 3 independent biological repetitions were conducted. RNA were extracted separatly and checked for quality before pooling together. Keywords: treated vs untreated comparison

2007-05-31 | GSE7945 | GEO

Col-0 flg22 - Flagellin response in mpk mutants

Project description:au-09-01_mpk_flagellin_edu - col-0 flg22 - Investigate flagellin mpk dependent genes - 2 weeks Col-0 plants treated 1h with flg22 1uM Keywords: treated vs untreated comparison

2012-01-01 | GSE23186 | GEO

mpk3 flg22 - Flagellin response in mpk mutants

Project description:au-09-01_mpk_flagellin_edu - mpk3 flg22 - Investigate flagellin mpk dependent genes - 2 weeks mpk3 plants treated 1 h with 1 microM flg22. Keywords: treated vs untreated comparison

2012-01-01 | GSE23188 | GEO

BTH-responsive rice genes

Project description:Benzothiadiazole (BTH) is a so-called âplant activatorâ and protects plants from diseases by activating the salicylic-acid (SA) signaling pathway. We identified BTH-responsive genes in rice leaves 24 h after treatment using rice 44K microarray. Keywords: response to chemical treatment BTH-treated leaves were compared with mock-treated leaves using single-color method with 4 biological replicates.

2010-06-05 | E-GEOD-7567 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data