Genomics

Dataset Information

0

Revealing the moleclar mechanisms of temperature acclimation and adaptation in marine diatoms with transcriptional responses to sub- and supra-optimal growth temperatures


ABSTRACT: Background: Ocean temperatures are projected to increase over the coming century, with dramatic consequences for the marine biosphere. Diatoms are important contributors to marine primary production and the ocean carbon cycle, yet the molecular mechanisms that regulate their acclimation and adaptation to temperature are poorly understood. Method: Here we use a transcriptomic approach to identify the molecular mechanisms associated with temperature acclimation and adaptation in closely related colder- and warmer-adapted diatom species. Results: We find contrasting patterns of differential expression at sub- and supra-optimal temperatures across the two species, which may be due to adaptive changes in baseline expression. Frontloaded and divested pathways indicate protein processing machinery, membrane structure, and the balance between temperature-independent photosynthesis and temperature-dependent metabolism are key elements of adaptation to temperature changes. Conclusions: Our findings suggest that transcriptional frontloading and divestment may provide a framework to interpret diatom acclimation and adaptation to temperature and success under future warming.

ORGANISM(S): Chaetoceros sp.

PROVIDER: GSE125205 | GEO | 2019/07/31

REPOSITORIES: GEO

Similar Datasets

2018-10-02 | GSE73987 | GEO
2015-05-29 | GSE65189 | GEO
2012-04-01 | GSE36886 | GEO
2012-03-31 | E-GEOD-36886 | biostudies-arrayexpress
2016-08-05 | GSE84680 | GEO
2021-10-20 | GSE186035 | GEO
2020-12-09 | PXD021416 | Pride
2016-08-05 | E-GEOD-84680 | biostudies-arrayexpress
2017-04-03 | PXD005615 | Pride
2021-03-02 | PXD018022 | Pride