Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression analysis of ASPN variant overexpressing WPMY-1 cells [human]

ABSTRACT: Gene expression analysis of ASPN variant overexpressing WPMY-1 cells

ORGANISM(S): Homo sapiens

PROVIDER: GSE131006 | GEO | 2020/04/13

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Gene expression analysis of ASPN variant overexpressing WPMY-1 cells [human]

Project description:Gene expression analysis of ASPN variant overexpressing WPMY-1 cells [human]

| PRJNA542276 | ENA

Expression data from human BPH1 and WPMY-1 cells treated with PAO.

Project description:Pao extract is an herbal preparation of the bark of an amazonian rain forest tree,Pao Pereira (Geissospermum vellosii),which could inhibit Benign prostatic hyperplasia (BPH).Characterizing the molecular alterations of BPH1 and WPMY-1 cells treated with PAO is important for understanding the molecular mechanisms of PAO inhibiting BPH. We used microarrays to detail the RNA expression.

2020-06-01 | GSE128856 | GEO

Direct comparison of HES2 ESC overexpressing CD30 variant with HES2 overexpressing GFP

Project description:HES2 ESC were infected with a lentivirus construct containing either CD30 (TNFRSF8) extracellular deficient variant or GFP, using the ViraPower™ Promoterless Lentiviral Gateway® Kits (Invitrogen). HES2 cells were recovered and grown for 19 passages. HES2 were commonly grown on Mouse Embryonic Feeder cells in the presence of KSOR media. Before collection of RNA, ES cells were FACs sorted with antibodies to GCMT-2 and CD9 to separate ES cells from differentiated cells and mouse feeders. The experiment was repeated in triplicate. The final aim was to deduce the effect of overexpressing the variant form of CD30 on gene expression in HES2 cells.

2009-10-10 | GSE13261 | GEO

Expression data from human BPH1 and WPMY-1 cells treated with Rauwolfia vomitoria (RWF).

Project description:Rauwolfia vomitoria extract is an herbal preparation of the root bark of a plant in the tropical forests of Africa, which could inhibit Benign prostatic hyperplasia (BPH). Characterizing the molecular alterations of BPH1 and WPMY-1 cells treated with RWF is important for understanding the molecular mechanisms of RWF inhibiting BPH. We used microarrays to detail the RNA expression.

2022-05-11 | GSE151643 | GEO

Direct comparison of HES2 ESC overexpressing CD30 variant with HES2 overexpressing GFP

Project description:HES2 ESC were infected with a lentivirus construct containing either CD30 (TNFRSF8) extracellular deficient variant or GFP, using the ViraPowerâ?¢ Promoterless Lentiviral GatewayÂ® Kits (Invitrogen). HES2 cells were recovered and grown for 19 passages. HES2 were commonly grown on Mouse Embryonic Feeder cells in the presence of KSOR media. Before collection of RNA, ES cells were FACs sorted with antibodies to GCMT-2 and CD9 to separate ES cells from differentiated cells and mouse feeders. The experiment was repeated in triplicate. The final aim was to deduce the effect of overexpressing the variant form of CD30 on gene expression in HES2 cells. Three consecutive passages of HES2 cells over-expressing either CD30V or GFP were grown and subject to FACs sorting, collection and microarray. A total of 6 samples, (3 replicates of these 2 populations) were used in the experiment.

2010-04-08 | E-GEOD-13261 | biostudies-arrayexpress

RNAi profiling by array of human WPMY-1 cells with PPARbeta/delta knock down and exposure to PPAR agaonists

Project description:Human WPMY-1 cells were depleted for PPARbeta/delta and exposed to the PPAR agonists GW501516.

2010-12-31 | E-MEXP-2756 | biostudies-arrayexpress

Genome-wide expression profiling of Hic-5 and TGFB in WPMY fibroblasts

2013-08-26 | GSE47354 | GEO

Transcription profiling by array of human WPMY-1 cells treated with GW501516 ((a PPARbetadelta agonist) or TFGBeta2

Project description:Microarray analyses of WPMY-1 cells, either untreated (solvent) or treated with GW501516 (0.3 µM), TGFBeta2 (10 ng/ml), or both ligands for 6 h.

2010-07-21 | E-MEXP-2748 | biostudies-arrayexpress

Gene expression analysis of Aspn+/+ and Aspn-/- fetal MSCs [mouse]

Project description:Gene expression analysis of Aspn+/+ and Aspn-/- fetal MSCs

2020-04-13 | GSE109642 | GEO

Genome-wide expression profiling of Hic-5 and TGFB in WPMY fibroblasts

Project description:Identifying the effect of the co-regulator Hic-5 (TGFB1I1) and TGFB on the transcriptional profile of WPMY human prostate fibroblast cells with view to further elucidating the broader biological role of Hic-5 and TGFB on fibroblast. Knockdown of Hic5 for 48 hours in PShTert-AR cells significantly altered the androgen regulation of approximately 1347 genes. The effect of Hic-5 knockdown was to suppress androgen regulation of approximately 85% of those transcripts, by either reducing androgen mediated repression or activition of gene expression. Isogenic WPMY-1 fibroblasts stably transfected with short-hairpin RNA against Hic-5 or transfected with non-specific negative control short-hairpin RNA, were kept in 5% hormone stripped FBS RPMI for 48 hours and subsequently treated with either ethanol vehicle control or TGFB for 16hr. Total RNA was extracted. Five independent vehicle and five TGFB siSCR and siHic5 samples were hybrydised to Affymetrix Human Gene 1.0 ST array chips.

2013-08-26 | E-GEOD-47354 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data