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Genome-wide occupancy of BDR1 and BDR3 (ChIP-seq)

ABSTRACT: We generated Arabidopsis lines expressing tagged (3X Myc tag) versions of BDR1 or BDR3 driven by their endogenous promoters on a bdrs triple mutant background (bdrs: cross of bdr1/AT5G25520 mutant SALK_142108C, bdr2/AT5G11430 mutant CS852350 and bdr3/AT2G25640 mutant SALK_059905). The genome-wide distribution of BDR1 and BDR3 in 8-day old seedlings were analyzed by ChIP-seq using an anti Myc antibody. As control, we performed in parallel a ChIP in wild-type seedlings using the anti-Myc tag antibody. We found that BDR1 is enriched at the border of a large number of genes in Arabidopsis genome while BDR3 is mostly enriched at the 3'-end of genes.

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE131772 | GEO | 2019/08/08

REPOSITORIES: GEO

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