Transcriptomics

Dataset Information

0

Distinct mitochondrial defects trigger the integrated stress response depending on the metabolic state of the cell


ABSTRACT: Mitochondrial dysfunction is associated with activation of the integrated stress response (ISR) but the underlying triggers remain unclear. We systematically combined acute mitochondrial inhibitors with genetic tools for compartment-specific NADH oxidation to trace mechanisms linking different forms of mitochondrial dysfunction to the ISR in proliferating mouse myoblasts and in differentiated myotubes. In myoblasts, we find that impaired NADH oxidation upon electron transport chain (ETC) inhibition depletes asparagine, activating the ISR via the eIF2α kinase GCN2. In myotubes, however, impaired NADH oxidation following ETC inhibition neither depletes asparagine nor activates the ISR, reflecting an altered metabolic state. ATP synthase inhibition in myotubes triggers the ISR via a distinct mechanism related to mitochondrial inner-membrane hyperpolarization. Our work dispels the notion of a universal path linking mitochondrial dysfunction to the ISR, instead revealing multiple paths that depend both on the nature of the mitochondrial defect and on the metabolic state of the cell.

ORGANISM(S): Mus musculus

PROVIDER: GSE132234 | GEO | 2020/05/27

REPOSITORIES: GEO

Similar Datasets

2018-02-26 | GSE99102 | GEO
2018-03-06 | PXD008833 | Pride
2023-10-24 | PXD033430 | Pride
2014-05-23 | E-GEOD-40789 | biostudies-arrayexpress
2009-12-24 | GSE19620 | GEO
2007-12-11 | E-GEOD-4330 | biostudies-arrayexpress
2022-02-17 | PXD026955 | Pride
2021-11-22 | PXD027754 | Pride
| PRJNA108085 | ENA
2017-04-07 | GSE84158 | GEO