Genomics

Dataset Information

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Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to tomato media


ABSTRACT: Summary: Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to tomato medium (TM) and tomato root exudates (TX) compared to minimal medium (MM). Purpose: Salmonella mRNA profile, when grown in different media was compared to minimal medium to reveal environment specific transcriptional changes. Methods: mRNA profiles were generated using Illumina HiSeq in triplicates. The sequences were analysed using Bowtie2 followed by Cufflinks. Overall design: mRNA profiles of Salmonella were generated using Illumina HiSeq in triplicates.

INSTRUMENT(S): Illumina HiSeq 2000 (Salmonella enterica)

ORGANISM(S): Salmonella enterica  

SUBMITTER: Jasper Schierstaedt  

PROVIDER: GSE132634 | GEO | 2020-03-31

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
GSE132634_RAW.tar Raw
GSE132634_tomato.txt.gz Txt
filelist.txt Txt
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