Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to tomato media
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ABSTRACT: Summary: Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to tomato medium (TM) and tomato root exudates (TX) compared to minimal medium (MM). Purpose: Salmonella mRNA profile, when grown in different media was compared to minimal medium to reveal environment specific transcriptional changes. Methods: mRNA profiles were generated using Illumina HiSeq in triplicates. The sequences were analysed using Bowtie2 followed by Cufflinks. Overall design: mRNA profiles of Salmonella were generated using Illumina HiSeq in triplicates.
INSTRUMENT(S): Illumina HiSeq 2000 (Salmonella enterica)
ORGANISM(S): Salmonella enterica
SUBMITTER:
Jasper Schierstaedt
PROVIDER: GSE132634 | GEO | 2020-03-31
REPOSITORIES: GEO
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