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Determine the genome-wide localization of histone and histone marks in different stages of D. discoideum

ABSTRACT: We report the chromatin immunoprecipitation followed by next generation sequencing (ChIP-seq) on H3, H3K4me1, H3K4me3, H3K9me3, H3K27ac, H3K27me3, and H3K36me3. ChIP-seq were sequenced to a depth of at least 8 million total reads/sample. We found that H3K4me3, H3K27ac and H3K4me1 show separation between unicellular and multicellular stages in principal component analysis (PCA); other marks were unable to show a clear separation in PCA.

ORGANISM(S): Dictyostelium discoideum

PROVIDER: GSE137599 | GEO | 2021/04/21

REPOSITORIES: GEO

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