Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Noncoding RNA and mRNA expression data from human colorectal cancer tissues and adjacent non-cancerous tissues

ABSTRACT: Total RNA from 6 pairs colorectal cancer tissues and its matched adjacent non-cancerous tissues was extracted and sequenced by high throughput sequencing. Then, differentially expressed circRNAs, long noncoding RNAs, and mRNAs were showed in colorectal cancer.

ORGANISM(S): Homo sapiens

PROVIDER: GSE143939 | GEO | 2023/01/18

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

circRNA expression data from human colorectal cancer tissues and the correponding non-cancerous tissues

Project description:To identifythe the functional roles of circRNAs in human colorectal cancer, we analysed the differenial expression of circRNAs in 5 colorectal cancer tissues and the corresponding non-cancerous tissues. We used microarrays to detail the global programme of circRNA expression in human colorectal cancer tissues and correponding non-cancerous tissues.

2020-01-03 | GSE142837 | GEO

Transcriptome of normal, paracancerouse and cancerous bladder tissues based on RNA-Seq method

Project description:In order to support our research of bladder cancer in human genome, we conducted massively parallel pyrosequencing of mRNAs (RNA-Seq) using normal, paracancerouse and cancerous human bladder tissues. We obtained a total of 30.0 million read pairs from normal, 33.1 million read pairs from paracancerous and 36.5 million read pairs from cancerous. The RNA-Seq data derived from the sample illustrated the differencially expression genes among normal, paracancerous and cancerous bladder tissues of human.

2013-01-01 | GSE35178 | GEO

Expression data from human colorectal cancer tissues and the corresponding non-cancerous tissues

Project description:To identify ythe the functional roles and the pathophysiological contributions of coding genes and noncoding RNAs in human colorectal carcinogenesis, we analysed the differenial expression of genes and noncoding RNAs in colorectal cancer tissues and the corresponding non-cancerous tissues.

2024-05-01 | GSE244968 | GEO

Expression data from human colorectal cancer tissues and the corresponding non-cancerous tissues [MeRIP-seq]

Project description:To identify the the functional roles and the pathophysiological contributions of the mRNA m6A modification in human colorectal carcinogenesis, we analysed the profile the landscape of the mRNA m6A modification in colorectal cancer tissues and the corresponding non-cancerous tissues.

2024-05-01 | GSE247632 | GEO

Noncoding RNA expression profiles in five pairs of bladder cancer tumor tissues and matched adjacent non-tumor tissues

Project description:In this study, we aimed to seek out abnormal noncoding RNAs (lncRNAs and circRNAs) involved in the development of bladder cancer through RNA-seq analysis. Transcriptome analysis of five pairs of bladder cancer tumor tissues and matched adjacent non-tumor tissues was completed in this project. A total of 68.18Gb clean data (sequencing data after quality control) was obtained. In conclusion, high-throughput sequencing analysis provided a distinctive landscape for the expression of noncoding RNAs and screened a series of significantly differently expressed lncRNAs and circRNAs, such as lncRNA LNPPS (ENST00000622374) and circSLC38A1. Further studies will focus on the potential function and intrinsic regulatory mechanisms of these significantly differently expressed lncRNAs and circRNAs in the development of bladder cancer.

2023-01-04 | GSE190079 | GEO

Transcriptome of normal, paracancerouse and cancerous bladder tissues based on RNA-Seq method

2013-01-01 | E-GEOD-35178 | biostudies-arrayexpress

Expression data of LncRNA from Human rectal cancer tissues and adjacent non-cancerous tissues

Project description:Expression data of LncRNA from Human rectal cancer tissues and adjacent non-cancerous tissues

| PRJNA587091 | ENA

circRNA expression data from human colorectal cancer tissues and the correponding non-cancerous tissues

Project description:circRNA expression data from human colorectal cancer tissues and the correponding non-cancerous tissues

| PRJNA598583 | ENA

DNA methylation profile of cancerous and non-cancerous renal tissues

Project description:DNA methylation profile of cancerous and non-cancerous renal tissues

| PRJNA701825 | ENA