Transcriptomics

Dataset Information

0

Impact of high salinity and the compatible solute glycine betaine on global gene expression of Bacillus subtilis


ABSTRACT: In order to reveal so far unknown facets of the adaptation of B. subtilis to growth under high-salinity conditions, a whole-transcriptome analysis of B. subtilis BSB (168 Trp+) was performed using strand-specific tiling arrays (tiling step of 22 nucleotides). In addition, the effects of glycine betaine (GB) were analyzed under high salinity and standard growth conditions in a chemically defined medium. Important novel findings were a sustained low-level induction of the SigB-dependent general stress response and strong repression of biofilm matrix genes under high-salinity conditions. GB influences gene expression not only under high-salinity, but also under standard growth conditions without additional salt.

ORGANISM(S): Bacillus subtilis Bacillus subtilis subsp. subtilis str. 168

PROVIDER: GSE145124 | GEO | 2020/05/18

REPOSITORIES: GEO

Similar Datasets

2010-05-15 | E-GEOD-17435 | biostudies-arrayexpress
2009-08-01 | GSE17435 | GEO
2008-11-19 | GSE9646 | GEO
2014-03-31 | E-GEOD-53333 | biostudies-arrayexpress
| PRJNA396769 | ENA
2019-12-31 | GSE139804 | GEO
| PRJNA159719 | ENA
2021-11-03 | PXD017297 | Pride
2021-11-03 | PXD017164 | Pride
2024-04-15 | MSV000094545 | GNPS